Extended Data Fig. 7: Receptor-ligand prediction from Slide-tags human tonsil data.
From: Slide-tags enables single-nucleus barcoding for multimodal spatial genomics
a, Expression of select marker genes by cell type cluster. b, Spatial mapping of cell types. c, Scatter plot of gene expression variance not explained by count noise and spatial permutation effect size of previously reported dark zone and light zone marker genes. d, Spatial mapping of dark zone, light zone, and transitional germinal centre B cells in two representative germinal centres. e, Volcano plot of receptor interaction intensity scores compared between zones in two representative germinal centres. All scale bars denote 500 μm. T double neg = T double negative, mDC = myeloid dendritic cells, pDC = plasmacytoid dendritic cells.
