Extended Data Fig. 3: TWA1 expression and TWA1 homologues. | Nature

Extended Data Fig. 3: TWA1 expression and TWA1 homologues.

From: The temperature sensor TWA1 is required for thermotolerance in Arabidopsis

Extended Data Fig. 3

a, TWA protein and TWA1 transcript abundance according to ATHENA proteomics database (https://athena.proteomics.wzw.tum.de)25. TPM, transcripts per kilobase and million reads; iBAQ are summed peptide intensity per protein normalized to the number of expected peptides. b, Alignment of TWA1 homologues identified by BLASTp searches against plant genomes on NCBI. Amino acid sequences were aligned with NCBI’s COBALT71. Alignments in red indicate highly conserved regions and lower conservation is shown in blue. E-values were calculated by using FASTA (https://fasta.bioch.virginia.edu) with TWA1 and lotus NnTWA1 as reference. Sequences: TWA1 - NP_001331741.1, Arabidopsis lyrata - XP_002873619.1, Sinapis alba - AF8055519.1, Glycine max - KAG5128726.1, Nelumbo nucifera - A0A1U7ZPG7 and from monocots: Phoenix dactylifera - A0A8B7BGH8, Zea mays - XP_035823187.1, Triticum aestivum - XP_044429385.1.

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