Extended Data Fig. 1: Neuronal and non-neuronal subclass distribution of individual soma and nucleus features.
From: Perisomatic ultrastructure efficiently classifies cells in mouse cortex
a) 2D UMAP embedding of all neuronal and non-neuronal cells inferred from somatic features, nuclear features and cortical depth. Manually labeled cellular subclasses are represented in color (1,619) and unlabeled examples in light gray (n = 92,391). b) Distribution and variation of cortical depth of all cells from the manually labeled column dataset. c) Distribution and variation of nucleus and somatic features of all cells from the column dataset. For all box plots, center line, median; box limits, upper and lower quartiles; whiskers, 1.5x interquartile range, outliers not shown. Individual cells, including outliers, are shown in the overlaid swarm plots. Color denotes human assigned subclass labels.
