Extended Data Fig. 3: Transcriptome age patterns in Fucus development using a denoised dataset. | Nature

Extended Data Fig. 3: Transcriptome age patterns in Fucus development using a denoised dataset.

From: A transcriptomic hourglass in brown algae

Extended Data Fig. 3

A, Overview of removal method for genes with ‘noisy’ expression profile using noisyR. B, TAI across embryogenesis in F. serratus using a denoised dataset. C, Flat line and reductive hourglass permutation tests in F. serratus under various RNA-seq transformations. D, TAI across embryogenesis in F. distichus using a denoised dataset. E, Flat line and reductive hourglass permutation tests in F. distichus under various RNA-seq transformations. 50,000 bootstraps were used to compute the standard deviation in B and D. Permutation tests were performed with 50,000 permutations.

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