Extended Data Fig. 2: scRNA-seq of LCMV GP33-specific CD8+ T cells on days 5 and >45 after chronic infection. | Nature

Extended Data Fig. 2: scRNA-seq of LCMV GP33-specific CD8+ T cells on days 5 and >45 after chronic infection.

From: An early precursor CD8+ T cell that adapts to acute or chronic viral infection

Extended Data Fig. 2

a, Gating strategy for sorting of splenic DbGP33+CD8+ T cells on days 5 (60,000 cells) and >45 (40,000 cells) for scRNA-seq. b,c, Gene set enrichment analysis enumerating enrichment of day 5 and >45 cell clusters for stem-like and effect/TD gene signatures: GSE84105, Im et al.1. Max = maximum. d,e,UMAP showing day 5 cell clusters (d) and expression of selected genes by each cluster (e). f,g, UMAP showing day >45 cell clusters (f) and expression of selected genes by each cluster (g).

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