Table 1 Summary of ape genome assemblies
Sample information | Assembly stats (v.2.0) Haplotype 1 (haplotype 2) or maternal (paternal) | ||||||||
|---|---|---|---|---|---|---|---|---|---|
Common name (abbreviation) | Scientific name | Tissue | Sex | Accession | Total no. of bases (Gb) | Contig N50 (Mb) | No. of T2T contigs | No. of non-rDNA gaps or missing telomeres | QV |
Chimpanzee (PTR) | Pan troglodytes | Lymphoblastoid | Male | 3.14 (3.03) | 146.29 (140.84) | 19 (17) | 0 (2) | 66.0 | |
Bonobo (PPA)a | Pan paniscus | Fibroblast or lymphoblastoid | Male | 3.21 (3.07) | 147.03 (147.48) | 20 (19) | 0 (0) | 62.7 | |
Gorilla (GGO)a | Gorilla gorilla | Fibroblast | Male | 3.55 (3.35) | 151.43 (150.80) | 19 (22) | 4 (0) | 61.7 | |
Bornean orangutan (PPY) | Pongo pygmaeus | Fibroblast | Male | 3.16 (3.05) | 140.59 (137.91) | 15 (13) | 1 (2) | 65.8 | |
Sumatran orangutan (PAB) | Pongo abelii | Fibroblast | Male | 3.17 (3.08) | 146.20 (140.60) | 14 (13) | 2 (3) | 63.3 | |
Siamang (SSY) | Symphalangus syndactylus | Lymphoblastoid | Male | 3.24 (3.12) | 146.71 (144.67) | 24 (20) | 0 (5) | 66.4 | |
Average | – | 3.24 (3.12) | 146.38 (143.72) | 18.5 (17.3) | 1.2 (2) | 64.3 | |||
