Extended Data Fig. 10: Inferring transcription level from Red-C data.
From: Elementary 3D organization of active and silenced E. coli genome
RNA-DNA (Red-C) and DNA-DNA (Micro-C) contact maps for the same genomic region are shown, along with the operon track, gene track, and transcription activity profile. The transcription activity is determined by summarizing, for each DNA bin, the number of contacts that RNA produced from this bin makes within ±10 kb from the bin. For example, the transcription activity of the cydAB operon is visualized by the signal in the dotted area of the RNA-DNA contact map. The red vertical line in the RNA-DNA contact map marks tRNA contacts.
