Fig. 4: Timing of SNV and SCNA events in LUAD and LUSC.
From: Clone copy number diversity is linked to survival in lung cancer
a, Method for timing somatic alterations using a Bradley–Terry model. amp., amplification. b,c, Bradley–Terry relative ranking estimate for the most frequent events in Tx421-P LUAD (n = 225; b) and LUSC (n = 126; c) cohorts. Plots include the following annotations: the distribution of the mean and maximum (max.) phylogenetic cancer cell fraction (PhyloCCF21) of the mutation clusters corresponding to the tree nodes that each event was assigned to, and the number of edges each event was assigned to, coloured by whether the edge was truncal or subclonal.
