Supplementary Figure 7: Quality control analysis of human bone marrow dsciATAC-seq data.
From: Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibility
(a–f) Single-cell data derived from BMMCs colored by their (a) donor, (b) fraction of reads in peaks (FRiP), (c) log10 unique nuclear fragments, (d) log10 total aligned nuclear fragments, (e) log10 library size, and (f) fraction of reads with PCR duplicates. (g) De novo embedding and clustering of the human BMMC data using the 7-mer k-mer strategy. Colors represent Louvain clustering from the principal components of the 7-mer deviations. (h, i) Same coordinates as (g) but colored according to annotations defined in Fig. 4b, c, respectively. All panels show n = 60,495 cells.
