Supplementary Figure 3: Comparison of PHATE to various methods on multiple artificial and non-biological datasets.
From: Visualizing structure and transitions in high-dimensional biological data
Note that methods with strong structural assumptions on the data, such as t-SNE (clusters) and Monocle2 (tree) are expected to fail on the subset of datasets which do not fit their assumptions. See Supplementary Note 2 for discussion. See the figure for the respective sample sizes for each dataset.
