Extended Data Fig. 4: Qualitative assessment of the reproducibility of embeddings using the Wong et al.9 dataset.
From: Initialization is critical for preserving global data structure in both t-SNE and UMAP
The exact analogue of Supplementary Fig. 7b from the original publication4. To quote the original caption: ‘Embeddings of full datasets as well as subsamples of varying sizes replicated thrice for [four] dimensionality reduction methods. The color-code is generated using the embedding of the full dataset and propagated to the subsamples.’
