Fig. 3: Shasta MHC assemblies compared with the reference human genome.
From: Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes
Unpolished Shasta assembly for CHM13 and HG00733, including HG00733 trio-binned maternal and paternal assemblies. Shaded gray areas are regions in which coverage (as aligned to GRCh38) drops below 20. Horizontal black lines indicate contig breaks. Blue and green describe unique alignments (aligning forward and reverse, respectively) and orange describes multiple alignments.
