Extended Data Fig. 2: Top ten upregulated pathways the disease condition for each specific cell type after Harmony integration without CellANOVA recovery.
From: Recovery of biological signals lost in single-cell batch integration with CellANOVA
Top ten upregulated pathways identified within the disease condition for each specific cell type in the Abedini et al. data and the KPMP data after Harmony integration without CellANOVA recovery. P-values for DEG analysis are calculated using a two-sided Wilcoxon signed-rank test.
