Supplementary Figure 4: Homoplasic nsSNPs that are fixed within Beijing lineage and also arise independently in other branches in the HCMC phylogeny. | Nature Genetics

Supplementary Figure 4: Homoplasic nsSNPs that are fixed within Beijing lineage and also arise independently in other branches in the HCMC phylogeny.

From: Frequent transmission of the Mycobacterium tuberculosis Beijing lineage and positive selection for the EsxW Beijing variant in Vietnam

Supplementary Figure 4

Tree shown is the ML phylogeny for 1,635 HCMC isolates with lineages highlighted, reproduced from Figure 1. Outer rings indicate the presence of derived alleles for the three nsSNPs that were found to be fixed within the Beijing lineage (2.2; including 2.2.1 and 2.2.2).

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