Supplementary Figure 4: Heatmap of log fold change (FC) of selected genes normalized to expression levels in 184A1 breast cells. | Nature Genetics

Supplementary Figure 4: Heatmap of log fold change (FC) of selected genes normalized to expression levels in 184A1 breast cells.

From: A transcriptome-wide association study of 229,000 women identifies new candidate susceptibility genes for breast cancer

Supplementary Figure 4

Two or three primer sets were designed for each gene (y axis), and mRNA levels were quantified by qPCR in the indicated cells lines (x axis), including 184A1. The FC of genes normalized to that in 184A1 equals the mRNA level in the indicated cells divided by the mRNA level in 184A1. The log2 (FC) over 184A1 is depicted as a heatmap. An X represents ‘not detectable’ with all primer sets. The experiment was repeated independently twice with similar results.

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