Extended Data Fig. 9: HLA genotyping. | Nature Genetics

Extended Data Fig. 9: HLA genotyping.

From: Pangenome-based genome inference allows efficient and accurate genotyping across a wide spectrum of variant classes

Extended Data Fig. 9

Weighted genotype concordances for samples NA12878, NA24385 and HG00731 resulting from a ‘leave-one-out’ experiment for HLA genes, as well as the average weighted genotype concordance across all three samples (red). For each gene, we separately computed concordances for the simpler, ‘biallelic’ regions, as well as the more difficult ‘complex’ regions.

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