Extended Data Fig. 2: Overview of cell type-enriched gene expression signatures and cell cycle scores.
From: Multiomic spatial landscape of innate immune cells at human central nervous system borders
a. Cell type assignment of the dataset using the Azimuth human PBMC reference dataset. b. UMAP visualizations color coded for the expression of gene modules enriched in the indicated cell types. The color coding represents gene module expression scores for each cell using the Mann-Whitney U statistic. c. UMAP visualizations color coded for cell cycle scoring. The color coding represents gene module expression scores for each cell using the Mann-Whitney U statistic. The module score classification is based on published gene expression signatures27.d. UMAP visualizations color coded for the expression of the published gene module29. The color coding represents module enrichment scores for each cell using the Mann-Whitney U statistic.
