Fig. 4: Pretrial tuning and silent trial results. | Nature Medicine

Fig. 4: Pretrial tuning and silent trial results.

From: Real-world deployment of a fine-tuned pathology foundation model for lung cancer biomarker detection

Fig. 4

In the AI-assisted EGFR screening, samples with EAGLE scores below the NPV threshold or above the PPV threshold can be spared from the rapid test. a, A heatmap of the reduction of rapid tests with isolines corresponding to the historical Idylla performance when modulating the NPV and PPV thresholds. Avg., average. The 95% confidence intervals (CI) were estimated via bootstrapping with 1,000 iterations. b, A zoomed-in area from a focusing on the top right corner where NPV and PPV are maximized. Threshold points are chosen within the Idylla noninferiority region with increasing levels of rapid test reduction. c, Pretrial deployment along the line established in b with the selected thresholds (thresh.) as vertical lines. The historical Idylla performance is shown with solid horizontal lines, and the dashed horizontal lines represent the 95% confidence intervals estimated via bootstrapping with 1,000 iterations. From top to bottom, NPV, PPV and rapid test reduction associated with AI-assisted workflow are presented. Shaded areas represent the 95% confidence interval estimated via bootstrapping with 1,000 iterations. d, A similar analysis as in c but for the silent trial cohort. The thresholds were chosen on the pretrial cohort and not on the silent trial cohort.

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