Supplementary Figure 3: Continuous RBP footprint coverage in the nucleus downstream from the 3′ end of lncRNA NEAT1 to the locus of miRNA-612.
From: Proximity-CLIP provides a snapshot of protein-occupied RNA elements in subcellular compartments
IGV tracks including APEX2-NES and H2B-APEX2 Proximity-CLIP reads, coverage and protein-bound clusters, as well as APEX2-NES and H2B-APEX2 Proximity-captured intact RNA and total cell RNA sequencing coverage. Data source, and coverage scales are depicted on the left side. Genomic coordinates and annotated Refseq genes are depicted on the top. Forward reads are colored red, reverse reads are in blue. Other lncRNAs that nuclear Proximity-CLIP suggested may serve as pri-miRNAs miRs-30a, −1208, −4435 are LINC00472, PVT1 and LINC00152, respectively.
