Extended Data Fig. 7: Reconstruction of complex SVs in 50 cancer samples.
a, Number of assembled complex SVs in each sample. Only samples with complex SVs detected are shown. b, Size distributions of complex SV fragments, simple inversions and simple deletions/duplications. Data were merged from eight cancer cell lines: A549, Caki2, K562, LNCaP, NCI-H460, PANC-1, SK-N-MC, and T47D. For the boxplot, the box represents the interquartile range (IQR, Q3-Q1), the white dot represents the median, the upper whisker extends to the last datum less than Q3 + 1.5×IQR, and the lower whisker extends to the first datum greater than Q1-1.5×IQR. c, Percentage of transition between different SV types in a complex SV assembly, averaged from our analysis in 50 cancer cell lines/tissues.
