Fig. 1: SnapHiC reveals chromatin loops at high resolution and accuracy.
From: SnapHiC: a computational pipeline to identify chromatin loops from single-cell Hi-C data
a, Overview of the SnapHiC workflow. b, The number of chromatin loops at 10-kb resolution identified by SnapHiC and HiCCUPS (with default or optimal parameters) from different numbers of mES cells. c, F1 score of SnapHiC- and HiCCUPS-identified loops (with default or optimal parameters) from different numbers of mES cells. In b,c, the dots and the error bars represent the mean values and the standard deviations calculated across six randomly sampled subsets, respectively.
