Table 1 Online services with SARS-CoV-2 genome resources and analytics

GISAID

Platform for assembled genome sharing and analysis

https://www.gisaid.org/

NCBI GenBank

Sequence Read Archive (SRA)

https://www.ncbi.nlm.nih.gov/sars-cov-2/

COG-UK

United Kingdom sequences database

https://www.cogconsortium.uk/

PANGO

Lineage analytics

https://cov-lineages.org/

Nextstrain

Phylogenetic analysis

https://nextstrain.org/

WBEC

Wastewater analytics

https://www.covid19wbec.org/

COVID-3D

Structural changes of lineages

http://biosig.unimelb.edu.au/covid3d/

Outbreak.info

Variants reports

https://outbreak.info/

CoVizu

Global and local variant distribution analytical tool

https://filogeneti.ca/covizu/

CoVsurver

GISAID quality check and annotation tool identifying phenotypically or epidemiologically interesting candidate amino acid (aa) changes for further research

https://corona.bii.a-star.edu.sg/, https://www.gisaid.org/epiflu-applications/covsurver-mutations-app/

KSA-KAUST

COVID-19 virus mutation tracker

https://www.cbrc.kaust.edu.sa/covmt/

COVID Genes

Shotgun RNA-seq viral data and host responses

https://covidgenes.weill.cornell.edu/