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Learning RNA structure prediction from crowd-designed RNAs

RNA molecules designed by citizen scientists and probed in high-throughput experiments highlighted discrepancies among RNA folding algorithms in their ability to predict RNA structure ensembles. These datasets were used to train a new algorithm that demonstrated improved performance in a collection of independent datasets, including viral genomic RNAs and mRNAs probed in cells.

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Fig. 1: Multitask training improves prediction of ensemble-averaged base-pairing.

References

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This is a summary of: Wayment-Steele, H. K. et al. RNA secondary structure packages evaluated and improved by high-throughput experiments. Nat. Methods https://doi.org/10.1038/s41592-022-01605-0 (2022).

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Learning RNA structure prediction from crowd-designed RNAs. Nat Methods 19, 1181–1182 (2022). https://doi.org/10.1038/s41592-022-01607-y

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