Extended Data Fig. 6: Robustness of STELLAR evaluated on the Barrett’s esophagus (BE) dataset.
From: Annotation of spatially resolved single-cell data with STELLAR
(a) Performance of STELLAR using different normalization strategies. ‘Unnorm’ stands for raw (unnormalized) data. Performance was evaluated as a mean accuracy score across n=5 runs of each normalization strategy. Error bars are from standard deviation. (b) Performance of STELLAR when misannotating proportion of randomly selected cells. In each run, cells were randomly selected and labels different than ground truth annotations were randomly assigned to cells in the annotated reference tonsil dataset. Performance was evaluated as an accuracy score across n=5 runs. Individual data points are shown. (c) Performance of STELLAR when removing different number of marker genes. In each run, different set of randomly selected marker genes was withheld from the reference tonsil dataset and BE datasets. Performance was evaluated as a mean accuracy score across n=5 runs. Error bars are from standard deviation.
