Extended Data Fig. 3: Matching and integration of cross-modality CyTOF and CITE-seq PBMC data.
From: Robust single-cell matching and multimodal analysis using shared and distinct features
MARIO integration of human PBMCs as measured by CyTOF and CITE-seq. (A) t-SNE plots of the PBMC CITE-seq and CODEX cells, pre-integration (left) and MARIO integrated (middle and right), colored by dataset of origin (left and middle) or colored by cell types (right). (B) Confusion matrix with MARIO cell-cell matching accuracy (balanced accuracy) across cell types. (C) t-SNE plots of the matched cells with protein or RNA expression levels overlaid.
