Extended Data Fig. 7: Further analysis of RGC and ExN composition.

a) UMAP embedding of cells colored by organoid type. b) Fraction of cells per annotated Leiden cluster. Number of cells is normalized by total cells in each organoid type. c) Fraction of cells per annotated Leiden cluster. Number of cells is normalized both by total cells in each segment/piece. d) UMAP embedding of cells colored by organoid. e-f) Top 15 GO terms associated to differentially expressed genes in RGC (e) or ExN (f). Ranked p-values were calculated using EnrichR.