Extended Data Fig. 9: Comparison of ST gene expression prediction performances.
From: A visual–omics foundation model to bridge histopathology with spatial transcriptomics
a, Comparison of ST gene expression prediction performances, represented by MSE and PCC respectively on 39 normal heart tissues using Loki, Hist2ST, HisToGene, BLEEP, and mclSTExp, respectively. In the box plots, the middle line represents the median, the box boundaries indicate the interquartile range, and the whiskers extend to data points within 1.5× the interquartile range. b, Summarized comparison of ST gene expression prediction performances, represented by MSE and PCC respectively across all samples using Loki, HisToGene, mclSTExp, BLEEP, and Hist2ST respectively. In the box plots, the middle line represents the median, the box boundaries indicate the interquartile range, and the whiskers extend to data points within 1.5× the interquartile range.
