Fig. 5: Prediction of 207 manually annotated BGCs from nine genomes.
From: De novo discovery of conserved gene clusters in microbial genomes with Spacedust
a–d, For each of the 207 BGCs, we computed the F1 score as the harmonic mean of recall and precision. The recall for a BGC is the fraction of genes in the BGC that have been predicted by the tool, and the precision is the fraction of genes in the predicted region that overlap the annotated BGC. Scatterplots of F1 scores of ClusterFinder versus Spacedust (a), DeepBGC versus Spacedust (b) and GECCO versus Spacedust (c) for the 207 annotated BGCs. d, Cumulative distribution of the F1 scores for the 207 BGCs.
