Supplementary Figure 3: Correlation between gene expression and the four epigenomic features. | Nature Neuroscience

Supplementary Figure 3: Correlation between gene expression and the four epigenomic features.

From: Epigenomic signatures underpin the axonal regenerative ability of dorsal root ganglia sensory neurons

Supplementary Figure 3

(A) Heatmap showing ATACseq and ChIPseq signal density for the up and downregulated genes upon DCA vs lam at equivalent genomic regions spanning from 2Kb upstream of the TSS to 2kb downstream of the TES. (B) Spearman correlation of the four epigenomic features (ATACseq, H3K9ac, H3K27ac, and H3K27me3 ChIPseq signal) with RNA expression level around the TSS of DE genes in the indicated conditions. (C) Integrative Genomic Viewer visualization of the ATACseq and ChIPseq signal density across the TSS and gene body of selected genes in the indicated conditions. Red box depicts TSS area.

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