Extended Data Fig. 4: Single-cell sequencing: cell purification and cluster expression. | Nature Neuroscience

Extended Data Fig. 4: Single-cell sequencing: cell purification and cluster expression.

From: CNS fibroblasts form a fibrotic scar in response to immune cell infiltration

Extended Data Fig. 4

a, Sample FACS plots of the purificaiton of Col1a1-GFP+ cells used for the single-cell sequencing analysis of Col1a1-GFP+ cells in health and EAE. b, UMAP plot of the single-cell RNA-seq dataset of Col1a1GFP+ cells in health and EAE with the individual sample identity labeled for each cell. c, Heat map depicting the expression of the 10 most differentially expressed genes in each cluster based on the logFC of the dataset. d, Heat map depicting the expression levels of genes specific to the labeled cell types, Olig = oligodendrocyte.

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