Extended Data Fig. 10: Correlation of mouse versus marmoset gene and ATAC clusters. | Nature Neuroscience

Extended Data Fig. 10: Correlation of mouse versus marmoset gene and ATAC clusters.

From: Temporally divergent regulatory mechanisms govern neuronal diversification and maturation in the mouse and marmoset neocortex

Extended Data Fig. 10

a, Overlap between mouse and marmoset gene clusters for neuronal cell types only (as presented in text), showing the top 4 pairs. b, Overlap between mouse and marmoset gene clusters for neuronal and glial cell types taken together (for comparison as a control), showing the top 6 pairs. c, Overlap between mouse and marmoset ATAC clusters for neuronal cell types only, showing the top 5 pairs. Color scale: average peak normalized read count. d, Overlap between mouse and marmoset ATAC clusters for neuronal and glial cell types taken together, showing the top 4 pairs. Color scale: average peak normalized read count. e, Methylation of ATAC peaks in each mouse shared-developmental neuronal ATAC cluster in the mouse bulk DNAme dataset in Fig. 1. Box and midline: 25th, 50th and 75th percentiles; whiskers: 1.5 interquartile range from box. Color scale for ATAC: average peak normalized read count. f, Methylation of ATAC peaks in each mouse shared-developmental neuronal and glial ATAC cluster, determined from the mouse bulk WGBS dataset presented in Fig. 1. Boxplots as in e. Color scale for ATAC: average peak normalized read count.

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