Extended Data Fig. 3: Reprogramming of H3.3 patterns during oogenesis.
From: Reprogramming of the histone H3.3 landscape in the early mouse embryo
a, Hierarchical clustering and correlation analysis of H3.3 ULI-NChIP-seq data. Heatmaps show Spearman’s correlation coefficients between the samples. Two biological replicates were analyzed for each developmental stage. b, Heatmaps showing genome-wide H3.3 and H3K4me3 enrichment. Published H3K4me3 dataset (GSE71434)39 was used. The analyses were performed for 10-kb bins genome-wide. The data is sorted by the H3.3 enrichment level in growing oocytes. Number of bins = 510,178. c, Heatmaps showing H3.3 (left) and H3K4me3 enrichment (right) around genic regions. The H3.3 patterns were subjected to k-means clustering. Published H3K4me3 dataset (GSE71434)39 was used.
