Table 1 Comparison of assembly results in three Pyrus species.
From: A de novo genome assembly of the dwarfing pear rootstock Zhongai 1
(P. ussuriensis × communis) × spp. ‘Zhongai 1’ | P. bretschneideri ‘Dangshangsu’1 | P. communis ‘Bartlett’18 | |
|---|---|---|---|
Assumed genome size (Mb) | 511.33 | 527 | 600 |
Contig number | 1,242 | 25,312 | 182,196 |
Contig length (Mb) | 510.59 | 501.3 | 507.69 |
Max contig length (Mb) | 6.53 | 0.3 | 0.13 |
Contig N50 (Kb) | 1,277.34 | 35.7 | 6.57 |
Contig N90 (Kb) | 202 | — | — |
Scaffold number | 784 | 2,103 | 142,083 |
Scaffold length (Mb) | 510.64 | 512.0 | 577.34 |
Max scaffold length (Mb) | 31.94 | 4.1 | 1.29 |
Scaffold N50 (Mb) | 23.45 | 0.54 | 0.09 |
Scaffold N90 (Mb) | 0.44 | — | — |
