Table 5 Mapping between PubTator entities types, PHARE classes and PGxCorpus entity types.
From: PGxCorpus, a manually annotated corpus for pharmacogenomics
Origin | Initial type | Type in PGxCorpus |
|---|---|---|
PubTator | Chemical | Chemical |
Disease | Disease | |
Gene | Gene_or_protein | |
Mutation | Limited_variation | |
PHARE | Drug | Chemical |
DrugMetabolite | Chemical | |
Gene | Gene_or_protein | |
GenomicRegion | Genomic_factor | |
GenomicVariation | Genomic_variation | |
GeneProduct | Gene_or_protein | |
Mutation | Limited_variation | |
Phenotype | Phenotype |
