Table 2 Characteristics of reconstructed MAGs with MGCs obtained from the IMG metagenomic data.

From: Unravelling the diversity of magnetotactic bacteria through analysis of open genomic databases

Organism

Phylum/Class

Metagenome accession in NCBI/IMG

Size (bp)

Scaffolds (no.)

GC (%)

N50 (bp)

CheckM completeness (%)

CheckM contamination (%)

Ca. Hydrogenedentes bacterium MAG_17963_hgd_11185

Ca. Hydrogenedentes

3300017963

3018788

288

60.18

11662

71.11

1.46

Ca. Hydrogenedentes bacterium MAG_17971_hgd_13044

Ca. Hydrogenedentes

3300017971

2683901

240

60.43

12541

60.01

1.16

Deltaproteobacteria bacterium MAG_00134_naph_00686,119

Deltaproteobacteria

3300000134

1498667

692

49.54

2676

60.69

3.87

Deltaproteobacteria bacterium MAG_00241_naph_01087,119

Deltaproteobacteria

3300000241

1547003

324

49.45

6761

55.59

2.41

Deltaproteobacteria bacterium MAG_00792_naph_01688,119

Deltaproteobacteria

3300000792

3032840

409

49.74

11269

89.28

5.86

Deltaproteobacteria bacterium MAG_09788_naph_3789

Deltaproteobacteria

3300009788

899797

137

47.24

7579

49.08

0.97

Deltaproteobacteria bacterium MAG_15370_dsfb_8190,120

Deltaproteobacteria

3300015370

3868622

334

48.42

14397

89.68

5.59

Deltaproteobacteria bacterium MAG_17929_sntb_2691

Deltaproteobacteria

3300017929

2777907

276

53.10

17193

62.13

5.10

Deltaproteobacteria bacterium MAG_17996_sntb_2092

Deltaproteobacteria

3300017996

1691080

454

53.11

4033

50.53

2.33

Deltaproteobacteria bacterium MAG_22204_dsfv_00193

Deltaproteobacteria

3300022204

2675335

75

52.74

60141

89.52

0.36

Deltaproteobacteria bacterium MAG_22309_dsfv_02248

Deltaproteobacteria

3300022309

2902378

66

55.15

78905

91.60

1.79

Gammaproteobacteria bacterium MAG_00150_gam_01094

Gammaproteobacteria

3300000150

2847655

486

49.07

8986

98.17

3.96

Gammaproteobacteria bacterium MAG_00160_gam_00995

Gammaproteobacteria

3300000160

2903803

318

49.10

15339

99.39

4.88

Gammaproteobacteria bacterium MAG_00172_gam_01896

Gammaproteobacteria

3300000172

2866084

274

48.97

18904

96.95

3.05

Gammaproteobacteria bacterium MAG_00188_gam_00697

Gammaproteobacteria

3300000188

2672010

567

48.83

6818

95.12

4.19

Gammaproteobacteria bacterium MAG_00212_gam_198

Gammaproteobacteria

3300000212

2103212

955

48.40

2901

78.43

5.08

Gammaproteobacteria bacterium MAG_00215_gam_02099

Gammaproteobacteria

3300000215

2931288

507

49.02

8845

95.73

5.34

Magnetococcales bacterium MAG_21055_mgc_1100

Ca. Etaproteobacteria

3300021055

3585593

930

52.41

5203

84.82

3.65

Nitrospinae bacterium MAG_09705_ntspn_70101

Nitrospinae

3300009705

2024644

120

42.63

30902

67.25

2.56

Nitrospirae bacterium MAG_10313_ntr_31102

Nitrospirae

3300010313

1933163

344

35.33

7568

90.20

3.64

Pelobacteraceae bacterium MAG_21601_9_030103

Deltaproteobacteria

3300021601

2536371

232

54.11

20074

78.15

8.39

Pelobacteraceae bacterium MAG_13126_9_058104

Deltaproteobacteria

3300013126

3576562

72

52.01

83631

91.61

1.29

Pelobacteraceae bacterium MAG_21600_9_004105

Deltaproteobacteria

3300021600

3430740

60

51.50

87025

90.32

0.65

Planctomycetes bacterium MAG_11118_pl_115106

Planctomycetes

3300011118

3767441

157

48.98

33372

89.44

1.24

Planctomycetes bacterium MAG_17991_pl_60107

Planctomycetes

3300017991

1289005

144

49.53

10179

64.20

0.00

Planctomycetes bacterium MAG_18080_pl_157108

Planctomycetes

3300018080

3144921

139

48.44

34208

90.91

3.41

Rhodospirillaceae bacterium MAG_01419_mvb_30

Alphaproteobacteria

3300001419

2811682

477

55.72

7268

94.58

4.10

Rhodospirillaceae bacterium MAG_04806_tlms_2109

Alphaproteobacteria

3300004806

2085124

309

57.51

8435

87.64

2.12

Rhodospirillaceae bacterium MAG_05422_2-02_14110

Alphaproteobacteria

3300005422

2281835

255

61.09

11800

85.45

0.50

Rhodospirillaceae bacterium MAG_05596_2-02_51111

Alphaproteobacteria

3300005596

1831947

329

61.19

6777

76.91

0.25

Rhodospirillaceae bacterium MAG_06104_tlms_034112

Alphaproteobacteria

3300006104

3186839

353

64.25

13005

89.59

2.53

Rhodospirillaceae bacterium MAG_22225_2-02_112113

Alphaproteobacteria

3300022225

2547095

147

61.01

26510

91.17

5.22

Ca. Omnitrophica bacterium SCGC AG-290-C17 (SAG)116

Ca. Omnitrophica

3300015153

1712617

171

48.60

13921

62.84

0.00

Uncultured microorganism SbSrfc.SA12.01.D19 (SAG)117

Deltaproteobacteria

3300022116

2501480

175

52.60

25257

49.13

0.00