Online-only Table 1 List of primer pairs to amplify general fungal communities in the samples included in this Data Descriptor7,17.
Primer pair | Sequence |
1737F / 2043 R | GGAAGTAAAAGTCGTAACAAGG / GCTGCGTTCTTCATCGATGC |
18S-F / 5.3S-R | GTAAAAGTCGTAACAAGGTTTC / GTTCAAAGAYTCGATGATTCAC |
58A2F / ITS4 | ATCGATGAAGAACGCAG / TCCTCCGCTTATTGATATGC |
fITS7 / ITS4 | GTGARTCATCGAATCTTTG / TCCTCCGCTTATTGATATGC |
fITS9 / ITS4 | GAACACAGCGAAATGTGA / TCCTCCGCTTATTGATATGC |
gITS7 / ITS4 | GTGARTCATCGARTCTTTG / TCCTCCGCTTATTGATATGC |
gITS7 / ITS4ngs | GTGARTCATCGARTCTTTG / TTCCTSCGCTTATTGATATGC |
ITS1 / ITS2 | TCCGTAGGTGAACCTGCGG / GCTGCGTTCTTCATCGATGC |
ITS1 / ITS4 | TCCGTAGGTGAACCTGCGG / TCCTCCGCTTATTGATATGC |
ITS1F / 58A2R | CTTGGTCATTTAGAGGAAGTAA / CTGCGTTCTTCATCGAT |
ITS1F / gITS7 | CTTGGTCATTTAGAGGAAGTAA / GTGARTCATCGARTCTTTG |
ITS1F / ITS2 | CTTGGTCATTTAGAGGAAGTAA / GCTGCGTTCTTCATCGATGC |
ITS1F / ITS3R | CTTGGTCATTTAGAGGAAGTAA / TCCTCCGCTTATTGATATGC |
ITS1F / ITS4 | CTTGGTCATTTAGAGGAAGTAA / TCCTCCGCTTATTGATATGC |
ITS1F_KYO1 / ITS2_KYO1 | CTHGGTCATTTAGAGGAASTAA / CTRYGTTCTTCATCGDT |
ITS1F_KYO1 / ITS2_KYO2 | CTHGGTCATTTAGAGGAASTAA / TTYRCTRCGTTCTTCATC |
ITS1F_KYO2 / ITS2_KYO2 | TAGAGGAAGTAAAAGTCGTAA / TTYRCTRCGTTCTTCATC |
ITS1F_KYO2 / LR3 | TAGAGGAAGTAAAAGTCGTAA / CCGTGTTTCAAGACGGG |
ITS1FI2 / 5.8 S | GAACCWGCGGARGGATCA / CGCTGCGTTCTTCATCG |
ITS1FI2 / ITS2 | GAACCWGCGGARGGATCA / GCTGCGTTCTTCATCGATGC |
ITS1Fngs / ITS2 | GGTCATTTAGAGGAAGTAA / GCTGCGTTCTTCATCGATGC |
ITS1ngs / ITS2 | TCCGTAGGTGAACCTGC / GCTGCGTTCTTCATCGATGC |
ITS1-OF / ITS4 | AACT(C)GG(C)CATTTAGAGGAAGT / TCCTCCGCTTATTGATATGC |
ITS2 / ITS4 | GCTGCGTTCTTCATCGATGC / TCCTCCGCTTATTGATATGC |
ITS2 / ITS5 | GCTGCGTTCTTCATCGATGC / GGAAGTAAAAGTCGTAACAAGG |
ITS2F / ITS2R | GCATCGATGAAGAACGC / CCTCCGCTTATTGATATGC |
ITS3 / ITS4 | GCATCGATGAAGAACGCAGC / TCCTCCGCTTATTGATATGC |
ITS3_KYO2 / ITS4 | GATGAAGAACGYAGYRAA / TCCTCCGCTTATTGATATGC |
ITS3_KYO2 / ITS4F | GATGAAGAACGYAGYRAA / CGCTTATTRATATGCTTAAXGXT |
ITS3_KYO2 / LR_KYO1b | GATGAAGAACGYAGYRAA / MGCWGCATTCCCAAACWA |
ITS3ngs mix / ITS4ngr mix + ARCH-ITS4-F1 | CA(T)CGATGAAGAACG(C)(A)G / TCCT(S)(C)(G)CTTATTGATATGC |
ITS3ngs1 to ITS3ngs11 / ITS4ngs | (C)(A)(T)CGATGAAGA(A)CG(C)(A)G / TCCTSCGCTTATTGATATGC |
ITS3tagmix1 to ITS3tagmix5 / ITS4ngs | CTAGACTCGTCA(T)CGATGAAGAACG(CA)G / TTCCTSCGCTTATTGATATGC |
ITS4 / fITS9 | TCCTCCGCTTATTGATATGC / GAACACAGCGAAATGTGA |
ITS4 / ITS3_KYO2 | TCCTCCGCTTATTGATATGC / GATGAAGAACGYAGYRAA |
ITS4 / ITS5 | TCCTCCGCTTATTGATATGC / GGAAGTAAAAGTCGTAACAAGG |
ITS4 / ITS9 | TCCTCCGCTTATTGATATGC / GCATTAGAAACTGCTCGTAATG |
ITS5 / 5.8S_fungi | GGAAGTAAAAGTCGTAACAAGG / CAAGAGATCCGTTGTTGAAAGTT |
ITS5 / ITS2 | GGAAGTAAAAGTCGTAACAAGG / GCTGCGTTCTTCATCGATGC |
ITS5 / ITS2_KYO2 | GGAAGTAAAAGTCGTAACAAGG / TTYRCTRCGTTCTTCATC |
ITS5 / ITS4 | GGAAGTAAAAGTCGTAACAAGG / TCCTCCGCTTATTGATATGC |
ITS7o / ITS4 | GTGAATCATCRAATYTTTG / TCCTCCGCTTATTGATATGC |
ITS86F / ITS4 | GTGAATCATCGAATCTTTGAA / TCCTCCGCTTATTGATATGC |
ITS9 / ITS4 | GCATTAGAAACTGCTCGTAATG / TCCTCCGCTTATTGATATGC |
ITS9F / ITS4 | CCATCTCATCCCTGCGTGTCTCCGACTCAG / TCCTCCGCTTATTGATATGC |
