Table 5 De novo assembly of C. rogercresseyi genome using chromatin interaction mapping.

From: Chromosome-scale genome assembly of the sea louse Caligus rogercresseyi by SMRT sequencing and Hi-C analysis

Scaffold number

Number of contigs

Length (bp)

1

1235

36,773,507

2

1097

35,015,117

3

821

33,056,366

4

879

31,368,135

5

947

30,517,993

6

847

30,174,979

7

909

29,781,277

8

941

27,708,916

9

856

25,041,035

10

852

24,730,313

11

1045

35,690,048

12

867

22,871,160

13

775

21,425,356

14

753

21,073,284

15

698

19,021,882

16

708

18,455,137

17

638

17,498,262

18

626

14,617,582

19

629

14,227,552

20

412

8,245,778

21

396

7,983,448

Total

16931

505,277,127

N50

 

29,781,277

  1. *Number of scaffolds: 21 (100% of all contigs in chromosome clusters, 95.6% of all contigs).
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