Table 2 JSON keys, and description for cydrasil-v3.json. All entries are strings.
JSON Key | Description |
|---|---|
cyID | New v3 sequence ID in CY-dataSource-dataSourceID format |
cyTaxID | New v3 taxonomic ID in the CY-sourceName-sourceDatabaseID#g__generaName.s__speciesName.str__strainName |
dataSource | Database, publication, or lab where the sequence was retrieved. |
dataSourceLink | A link to the entry in the corresponding dataSource or contact information for the submitting lab. |
id | The id number of the sequence, initially assigned alphabetically. |
notes | Contains notes about sequences including other names if strains are identical, or if the organism is part of an outgroup. |
ogCyName | Name corresponding to the sequence in Cydrasil version 2 and earlier. |
sequence | The DNA sequence corresponding to the 16S rRNA gene with no masking. |
warnings | This is reserved for warnings regarding sequence quality, taxonomic naming errors, or other oddities. |
