Online-only Table 1 Sample and sequencing information.

From: Short-read and long-read full-length transcriptome of mouse neural stem cells across neurodevelopmental stages

Stage

Sample ID

cDNA peak (bp)

Short-read data

Long-read data

Clean reads (Million)

GC (%)

Q30 (%)

TIN (median)

Uniquely mapped reads (%)

Average mapped length (bp)

Mean read length (bp)

Number of reads (Million)

>Q7

E15.5

E15.5_1

1282

19.3

43

90.7

50.6

86.8

295.37

754

2.3

98.10%

E15.5_2

1310

21.6

44

90.7

51.8

88.46

294.78

E15.5_3

1399

18

45

90.5

51.8

89.67

295.15

E17.5

E17.5_1

1393

28.5

42

91.2

45.4

86.41

295.46

845.8

2.8

98.00%

E17.5_2

1384

26.3

42

90.9

45.9

86.08

295.46

E17.5_3

1378

17.7

42.5

88.4

50.8

83.47

293.53

E17.5_4

1388

15.7

42

90.8

45.5

83.81

295.53

E17.5_5

1342

25

44

90.8

49

86.57

295.08

E17.5_6

1316

22.9

42.5

92.9

49.4

84.36

295.56

P1.5

P1.5_1

1299

14.5

41

91.3

36

82.34

294.51

747

2.2

98.50%

P1.5_2

1358

13.9

41

91.2

34.9

82.76

294.51

P1.5_3

1402

33.2

42

92.4

41.7

86.2

295.54

P1.5_4

1334

19.2

43

89.6

48.2

82.43

293.55

P8

P8_1

1311

44.7

42

94.8

32.2

90.02

298.13

782.6

2.7

98.40%

P8_2

1309

45.6

40

95.4

25

86.61

298.3

P8_3

1294

45.1

40

95.5

26.5

86.04

298.35

P8_4

1307

44.3

42

95

33.2

91.77

298.29

P60

P60_1

1833

31.5

44

90.8

51.1

89.7

295.36

856.7

2.4

98.50%

P60_2

1817

26.3

44

91.4

53.1

89.59

296.78

P60_3

1394

14.6

43

86.6

55.3

84.71

291.35

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