Table 9 Classification of ncRNAs in C. erythropterus genome.
From: A chromosome-level genome assembly of the redfin culter (Chanodichthys erythropterus)
Type | Copy number | Average length (bp) | Total length (bp) | % of genome | |
|---|---|---|---|---|---|
miRNA | 1,609 | 114.79 | 184,694 | 0.017014 | |
tRNA | 8,135 | 75.75 | 616,216 | 0.056767 | |
rRNA | rRNA | 1,251 | 133.09 | 166,498 | 0.015338 |
18 S | 49 | 448.49 | 21,976 | 0.002024 | |
28 S | 105 | 278.25 | 29,216 | 0.002691 | |
5.8 S | 8 | 157.00 | 1,256 | 0.000116 | |
5 S | 1,089 | 104.73 | 114,050 | 0.010507 | |
snRNA | snRNA | 1,060 | 152.67 | 161,831 | 0.014908 |
CD-box | 231 | 145.46 | 33,601 | 0.003095 | |
HACA-box | 93 | 151.15 | 14,057 | 0.001295 | |
splicing | 690 | 155.31 | 107,164 | 0.009872 | |
