Table 12 Precision (Pr), recall (Re) and F1-score (F1) results per class and macro-average F1-score per model for section classification.

Section type	SVM			BERT			Count samples
Section type	Pr	Re	F1	Pr	Re	F1	Count samples
Anrede	0.99	1.00	0.99	0.99	1.00	0.99	99
AktuellDiagnosen	0.73	0.51	0.60	0.67	0.67	0.67	694
Diagnosen	0.69	0.78	0.73	0.78	0.79	0.79	1,044
AllergienUnverträglichkeitenRisiken	0.97	0.94	0.95	0.97	0.96	0.96	236
Anamnese	0.90	0.81	0.85	0.81	0.93	0.87	281
AufnahmeMedikation	0.92	0.10	0.18	0.43	0.95	0.59	593
KUBefunde	0.98	0.97	0.98	0.98	0.97	0.98	1,105
Befunde	0.84	0.80	0.82	0.95	0.78	0.86	2,519
EchoBefunde	0.89	0.89	0.89	0.85	0.96	0.90	290
Labor	0.97	1.00	0.98	0.98	0.99	0.98	12,220
Zusammenfassung	0.90	0.95	0.92	0.94	0.94	0.94	843
Mix	0.87	0.64	0.74	0.65	0.88	0.75	242
EntlassMedikation	0.64	0.91	0.75	0.79	0.26	0.39	1,034
Abschluss	0.99	0.98	0.98	0.97	0.98	0.98	695
Macro avg. F1-score	0.88	0.80	0.81	0.84	0.86	0.83	21,895

For further information, confusion matrix and hyper-parameters, see Supplementary File 3.

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