Table 4 Metrics of Periconia digitata’s genome assembly (Pdig) and comparison to P. macrospinosa (Pmac) (assembly GCA_003073855.1 Perma1, Knapp et al. 2018) and P. R9002 (assembly GCA_023627715.1 ASM2362771v1).

From: Genome sequence and annotation of Periconia digitata a hopeful biocontrol agent of phytopathogenic oomycetes

Species

Number of Contigs/scaffolds

Minimal length bp)

Maximal length bp)

N50 (bp)

L50

N90 (bp)

L90

Mean (bp)

Median (bp)

Total assembly (pb)

Pdig

15/0

27,658

5,846,744

3,040,500

5

1,824,482

11

2,601,553

2,871,062

39,023,295

Pmac

2,976/1,566

1,000

1,324,167

140,954

101

18,263

478

35,116

6,289

54,992,973

R9002

1,000/896

501

1401378

331741

39

53319

140

49720

2953

44,549,138

Back to article page