Table 3 Genome assembly and annotation statistics for two chromosome-level assemblies of Entomobrya proxima and Sinella curviseta.
Characteristics | E. proxima | S. curviseta |
|---|---|---|
Genome assembly | ||
Size (Mb) | 362.37 | 363.44 |
Number of scaffolds | 461 | 476 |
Number of chromosomes | 6 | 6 |
Scaffold N50 length (Mb) | 57.67 | 62.78 |
GC (%) | 35.93 | 37.52 |
BUSCO completeness (%) | 96.1 | 96.8 |
Protein-coding genes | ||
Number | 20,988 | 22,485 |
Mean gene length (bp) | 4,610.4 | 4,517.3 |
BUSCO completeness (%) | 96.9 | 98.3 |
Repetitive elements | ||
Size (Mb) | 80.06 (22.16%) | 51.44 (14.16%) |
DNA transposons (Mb) | 6.60 (1.77%) | 4.97 (1.34%) |
SINEs (kb) | 10.23 (0.00%) | 35.67 (0.01%) |
LINEs (Mb) | 5.87 (1.77%) | 3.13 (0.87%) |
LTRs (Mb) | 18.82 (5.20%) | 14.77 (4.08%) |
Unclassified (Mb) | 43.03 (11.88%) | 22.97 (6.32%) |
Number of ncRNA | 391 | 583 |
rRNA | 23 | 55 |
miRNA | 23 | 34 |
snRNA | 42 | 58 |