Table 3 Evaluation of transcriptome assembly in Alashan Ground Squirrels.

From: Exploring Alashan Ground Squirrel (Spermophilus alashanicus) Diversity: Metagenomic and Transcriptomic Datasets from the Helan Mountains

Type

Unigene

Total number

72156

Total base

328300803

Largest length (bp)

67842

Smallest length (bp)

227

Average length (bp)

4549.88

N50 length (bp)

6703

E90 N50 length (bp)

6052

Fragment mapped percent (%)

80.969

GC percent (%)

47.51

TransRate score

0.26807

BUSCO score

C:98.4% [S:59.1%; D:39.3%]

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