Table 3 Summary of genome assemblies of Avena longiglumis of this study and published tetraploid A. insularis and hexaploid A. sativa. –: unavailable data.
From: Chromosome-level genome assembly of the diploid oat species Avena longiglumis
Species | Avena longiglumis PI 657387 | A.insularis BYU2095 | A.sativa cv. Sang | A. insularis CN108634 | A. sativa ssp. nuda cv. Sanfensan9 | A. sativa_OT3098v.2 |
|---|---|---|---|---|---|---|
Number of contigs | 2,381 | 6,523 | 1,823,168 | 2,732 | 436 | 1,343 |
Number of scaffolds | 414 | 15 | 22 | — | — | 84 |
Assembled sequences | 3,960,965,270 bp | 7,256,293,586 bp | 11,012,379,496 bp | 7,519,018,440 bp | 10,757,433,345 bp | 10,839,200,031 bp |
Contig N50 length | 12.682 Mb | 5.157 Mb | 21.001 kb | 5.637 Mb | 75.273 Mb | 71.000 Mb |
Scaffold N50 length | 583.925 Mb | 481.348 Mb | 490.397 Mb | — | — | 374.00 Mb |
BUSCO | 99.00% | 99.60% | 99.40% | 99.32% | 99.44% | 99.38% |
