Table 3 Statistics of Polylopha cassiicola assemblies.
Item | Contig | Purged contig | Hi-C raised scaffold | Polished scaffold |
|---|---|---|---|---|
No. of contigs | 76 | 65 | 22 | 22 |
Size (Mb) | 297.20 | 294.45 | 294.46 | 302.03 |
N50 (Mb) | 8.54 | 8.54 | 12.96 | 13.19 |
GC content | 35.16% | 35.12% | 35.12% | 35.14% |
Single-copy BUSCOs | 94.7% | 94.8% | 94.9% | 98.1% |
Duplicated BUSCOs | 0.5% | 0.3% | 0.3% | 0.3% |
Fragmented BUSCOs | 2.2% | 2.2% | 2.2% | 0.3% |
Missing BUSCOs | 2.6% | 2.7% | 2.6% | 1.3% |
