Table 2 Metadata for 16S rRNA gene amplicons sequencing.
From: A multi-omics dataset of the response to early plant polysaccharide ingestion in rabbits
accession | study | bioproject_accession | biosample_accession | sample_ID | luminal_content | library_ID | title | library_strategy | library_source | library_selection | library_layout | platform | instrument_model | design_description | filetype | filename | filename2 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SRR11430062 | SRP254184 | PRJNA615661 | SAMN14464043 | 301 | caecum | CP1802-cc301_TCCATT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc301_TCCATT-C43D4_L001_R1.fastq.gz | CP1802-cc301_TCCATT-C43D4_L001_R2.fastq.gz |
SRR11430061 | SRP254184 | PRJNA615661 | SAMN14464044 | 302 | caecum | CP1802-cc302_AAACAA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc302_AAACAA-C43D4_L001_R1.fastq.gz | CP1802-cc302_AAACAA-C43D4_L001_R2.fastq.gz |
SRR11429850 | SRP254184 | PRJNA615661 | SAMN14464045 | 303 | caecum | CP1802-cc303_AATAAT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc303_AATAAT-C43D4_L001_R1.fastq.gz | CP1802-cc303_AATAAT-C43D4_L001_R2.fastq.gz |
SRR11429807 | SRP254184 | PRJNA615661 | SAMN14464046 | 304 | caecum | CP1802-cc304_GCCCGA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc304_GCCCGA-C43D4_L001_R1.fastq.gz | CP1802-cc304_GCCCGA-C43D4_L001_R2.fastq.gz |
SRR11429928 | SRP254184 | PRJNA615661 | SAMN14464047 | 307 | caecum | CP1802-cc307_ACCGAA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc307_ACCGAA-C43D4_L001_R1.fastq.gz | CP1802-cc307_ACCGAA-C43D4_L001_R2.fastq.gz |
SRR11429917 | SRP254184 | PRJNA615661 | SAMN14464048 | 309 | caecum | CP1802-cc309_ACCTCA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc309_ACCTCA-C43D4_L001_R1.fastq.gz | CP1802-cc309_ACCTCA-C43D4_L001_R2.fastq.gz |
SRR11429906 | SRP254184 | PRJNA615661 | SAMN14464049 | 310 | caecum | CP1802-cc310_AGGGAT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc310_AGGGAT-C43D4_L001_R1.fastq.gz | CP1802-cc310_AGGGAT-C43D4_L001_R2.fastq.gz |
SRR11430091 | SRP254184 | PRJNA615661 | SAMN14464050 | 312 | caecum | CP1802-cc312_TGTCTA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc312_TGTCTA-C43D4_L001_R1.fastq.gz | CP1802-cc312_TGTCTA-C43D4_L001_R2.fastq.gz |
SRR11430080 | SRP254184 | PRJNA615661 | SAMN14464051 | 313 | caecum | CP1802-cc313_CGCATT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc313_CGCATT-C43D4_L001_R1.fastq.gz | CP1802-cc313_CGCATT-C43D4_L001_R2.fastq.gz |
SRR11430069 | SRP254184 | PRJNA615661 | SAMN14464052 | 314 | caecum | CP1802-cc314_CCCACG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc314_CCCACG-C43D4_L001_R1.fastq.gz | CP1802-cc314_CCCACG-C43D4_L001_R2.fastq.gz |
SRR11430060 | SRP254184 | PRJNA615661 | SAMN14464053 | 317 | caecum | CP1802-cc317_CCCGAG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc317_CCCGAG-C43D4_L001_R1.fastq.gz | CP1802-cc317_CCCGAG-C43D4_L001_R2.fastq.gz |
SRR11430049 | SRP254184 | PRJNA615661 | SAMN14464054 | 319 | caecum | CP1802-cc319_TTCCGT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc319_TTCCGT-C43D4_L001_R1.fastq.gz | CP1802-cc319_TTCCGT-C43D4_L001_R2.fastq.gz |
SRR11430038 | SRP254184 | PRJNA615661 | SAMN14464055 | 320 | caecum | CP1802-cc320_ATATCC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc320_ATATCC-C43D4_L001_R1.fastq.gz | CP1802-cc320_ATATCC-C43D4_L001_R2.fastq.gz |
SRR11430027 | SRP254184 | PRJNA615661 | SAMN14464056 | 321 | caecum | CP1802-cc321_TCGGCC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc321_TCGGCC-C43D4_L001_R1.fastq.gz | CP1802-cc321_TCGGCC-C43D4_L001_R2.fastq.gz |
SRR11430016 | SRP254184 | PRJNA615661 | SAMN14464057 | 322 | caecum | CP1802-cc322_GTCAGG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc322_GTCAGG-C43D4_L001_R1.fastq.gz | CP1802-cc322_GTCAGG-C43D4_L001_R2.fastq.gz |
SRR11430005 | SRP254184 | PRJNA615661 | SAMN14464058 | 324 | caecum | CP1802-cc324_TAACCG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc324_TAACCG-C43D4_L001_R1.fastq.gz | CP1802-cc324_TAACCG-C43D4_L001_R2.fastq.gz |
SRR11429894 | SRP254184 | PRJNA615661 | SAMN14464059 | 326 | caecum | CP1802-cc326_CAATTA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc326_CAATTA-C43D4_L001_R1.fastq.gz | CP1802-cc326_CAATTA-C43D4_L001_R2.fastq.gz |
SRR11429883 | SRP254184 | PRJNA615661 | SAMN14464060 | 327 | caecum | CP1802-cc327_AGTGTC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc327_AGTGTC-C43D4_L001_R1.fastq.gz | CP1802-cc327_AGTGTC-C43D4_L001_R2.fastq.gz |
SRR11429872 | SRP254184 | PRJNA615661 | SAMN14464061 | 328 | caecum | CP1802-cc328_ATTGAG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc328_ATTGAG-C43D4_L001_R1.fastq.gz | CP1802-cc328_ATTGAG-C43D4_L001_R2.fastq.gz |
SRR11429861 | SRP254184 | PRJNA615661 | SAMN14464062 | 329 | caecum | CP1802-cc329_TATTGG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc329_TATTGG-C43D4_L001_R1.fastq.gz | CP1802-cc329_TATTGG-C43D4_L001_R2.fastq.gz |
SRR11429849 | SRP254184 | PRJNA615661 | SAMN14464063 | 330 | caecum | CP1802-cc330_AACGCA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc330_AACGCA-C43D4_L001_R1.fastq.gz | CP1802-cc330_AACGCA-C43D4_L001_R2.fastq.gz |
SRR11429838 | SRP254184 | PRJNA615661 | SAMN14464064 | 331 | caecum | CP1802-cc331_ACGTCG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc331_ACGTCG-C43D4_L001_R1.fastq.gz | CP1802-cc331_ACGTCG-C43D4_L001_R2.fastq.gz |
SRR11429991 | SRP254184 | PRJNA615661 | SAMN14464065 | 332 | caecum | CP1802-cc332_GTACAG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc332_GTACAG-C43D4_L001_R1.fastq.gz | CP1802-cc332_GTACAG-C43D4_L001_R2.fastq.gz |
SRR11429980 | SRP254184 | PRJNA615661 | SAMN14464066 | 333 | caecum | CP1802-cc333_GTGCTG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc333_GTGCTG-C43D4_L001_R1.fastq.gz | CP1802-cc333_GTGCTG-C43D4_L001_R2.fastq.gz |
SRR11429969 | SRP254184 | PRJNA615661 | SAMN14464067 | 334 | caecum | CP1802-cc334_CAATGC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc334_CAATGC-C43D4_L001_R1.fastq.gz | CP1802-cc334_CAATGC-C43D4_L001_R2.fastq.gz |
SRR11429958 | SRP254184 | PRJNA615661 | SAMN14464068 | 335 | caecum | CP1802-cc335_CCGTAG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc335_CCGTAG-C43D4_L001_R1.fastq.gz | CP1802-cc335_CCGTAG-C43D4_L001_R2.fastq.gz |
SRR11429947 | SRP254184 | PRJNA615661 | SAMN14464069 | 337 | caecum | CP1802-cc337_CTCCCC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc337_CTCCCC-C43D4_L001_R1.fastq.gz | CP1802-cc337_CTCCCC-C43D4_L001_R2.fastq.gz |
SRR11429936 | SRP254184 | PRJNA615661 | SAMN14464070 | 338 | caecum | CP1802-cc338_GACTAC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc338_GACTAC-C43D4_L001_R1.fastq.gz | CP1802-cc338_GACTAC-C43D4_L001_R2.fastq.gz |
SRR11429825 | SRP254184 | PRJNA615661 | SAMN14464071 | 340 | caecum | CP1802-cc340_CATAAC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc340_CATAAC-C43D4_L001_R1.fastq.gz | CP1802-cc340_CATAAC-C43D4_L001_R2.fastq.gz |
SRR11429814 | SRP254184 | PRJNA615661 | SAMN14464072 | 341 | caecum | CP1802-cc341_CCCTCC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc341_CCCTCC-C43D4_L001_R1.fastq.gz | CP1802-cc341_CCCTCC-C43D4_L001_R2.fastq.gz |
SRR11429806 | SRP254184 | PRJNA615661 | SAMN14464073 | 342 | caecum | CP1802-cc342_TGTTCG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc342_TGTTCG-C43D4_L001_R1.fastq.gz | CP1802-cc342_TGTTCG-C43D4_L001_R2.fastq.gz |
SRR11429805 | SRP254184 | PRJNA615661 | SAMN14464074 | 343 | caecum | CP1802-cc343_CATGAG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc343_CATGAG-C43D4_L001_R1.fastq.gz | CP1802-cc343_CATGAG-C43D4_L001_R2.fastq.gz |
SRR11429804 | SRP254184 | PRJNA615661 | SAMN14464075 | 344 | caecum | CP1802-cc344_AAGTGG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc344_AAGTGG-C43D4_L001_R1.fastq.gz | CP1802-cc344_AAGTGG-C43D4_L001_R2.fastq.gz |
SRR11429803 | SRP254184 | PRJNA615661 | SAMN14464076 | 347 | caecum | CP1802-cc347_CTTTAG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc347_CTTTAG-C43D4_L001_R1.fastq.gz | CP1802-cc347_CTTTAG-C43D4_L001_R2.fastq.gz |
SRR11429802 | SRP254184 | PRJNA615661 | SAMN14464077 | 349 | caecum | CP1802-cc349_GAGAAC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc349_GAGAAC-C43D4_L001_R1.fastq.gz | CP1802-cc349_GAGAAC-C43D4_L001_R2.fastq.gz |
SRR11429801 | SRP254184 | PRJNA615661 | SAMN14464078 | 350 | caecum | CP1802-cc350_CCAACA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc350_CCAACA-C43D4_L001_R1.fastq.gz | CP1802-cc350_CCAACA-C43D4_L001_R2.fastq.gz |
SRR11429800 | SRP254184 | PRJNA615661 | SAMN14464079 | 352 | caecum | CP1802-cc352_GTCAAA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc352_GTCAAA-C43D4_L001_R1.fastq.gz | CP1802-cc352_GTCAAA-C43D4_L001_R2.fastq.gz |
SRR11429799 | SRP254184 | PRJNA615661 | SAMN14464080 | 353 | caecum | CP1802-cc353_CCCTGG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc353_CCCTGG-C43D4_L001_R1.fastq.gz | CP1802-cc353_CCCTGG-C43D4_L001_R2.fastq.gz |
SRR11429930 | SRP254184 | PRJNA615661 | SAMN14464081 | 354 | caecum | CP1802-cc354_CGCCAC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc354_CGCCAC-C43D4_L001_R1.fastq.gz | CP1802-cc354_CGCCAC-C43D4_L001_R2.fastq.gz |
SRR11429929 | SRP254184 | PRJNA615661 | SAMN14464082 | 356 | caecum | CP1802-cc356_TAATAT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc356_TAATAT-C43D4_L001_R1.fastq.gz | CP1802-cc356_TAATAT-C43D4_L001_R2.fastq.gz |
SRR11429927 | SRP254184 | PRJNA615661 | SAMN14464083 | 357 | caecum | CP1802-cc357_TGGTGT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc357_TGGTGT-C43D4_L001_R1.fastq.gz | CP1802-cc357_TGGTGT-C43D4_L001_R2.fastq.gz |
SRR11429926 | SRP254184 | PRJNA615661 | SAMN14464084 | 358 | caecum | CP1802-cc358_CTACCG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc358_CTACCG-C43D4_L001_R1.fastq.gz | CP1802-cc358_CTACCG-C43D4_L001_R2.fastq.gz |
SRR11429925 | SRP254184 | PRJNA615661 | SAMN14464085 | 359 | caecum | CP1802-cc359_CGTGCG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc359_CGTGCG-C43D4_L001_R1.fastq.gz | CP1802-cc359_CGTGCG-C43D4_L001_R2.fastq.gz |
SRR11429924 | SRP254184 | PRJNA615661 | SAMN14464086 | 360 | caecum | CP1802-cc360_GATTCA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc360_GATTCA-C43D4_L001_R1.fastq.gz | CP1802-cc360_GATTCA-C43D4_L001_R2.fastq.gz |
SRR11429923 | SRP254184 | PRJNA615661 | SAMN14464087 | 362 | caecum | CP1802-cc362_TACCAA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc362_TACCAA-C43D4_L001_R1.fastq.gz | CP1802-cc362_TACCAA-C43D4_L001_R2.fastq.gz |
SRR11429922 | SRP254184 | PRJNA615661 | SAMN14464088 | 364 | caecum | CP1802-cc364_CGTACT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc364_CGTACT-C43D4_L001_R1.fastq.gz | CP1802-cc364_CGTACT-C43D4_L001_R2.fastq.gz |
SRR11429921 | SRP254184 | PRJNA615661 | SAMN14464089 | 366 | caecum | CP1802-cc366_CACACT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc366_CACACT-C43D4_L001_R1.fastq.gz | CP1802-cc366_CACACT-C43D4_L001_R2.fastq.gz |
SRR11429920 | SRP254184 | PRJNA615661 | SAMN14464090 | 367 | caecum | CP1802-cc367_GAGCAA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc367_GAGCAA-C9F6J_L001_R1.fastq.gz | CP1802-cc367_GAGCAA-C9F6J_L001_R2.fastq.gz |
SRR11429919 | SRP254184 | PRJNA615661 | SAMN14464091 | 368 | caecum | CP1802-cc368_ACTTTT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc368_ACTTTT-C9F6J_L001_R1.fastq.gz | CP1802-cc368_ACTTTT-C9F6J_L001_R2.fastq.gz |
SRR11429918 | SRP254184 | PRJNA615661 | SAMN14464092 | 369 | caecum | CP1802-cc369_ACTCGA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc369_ACTCGA-C43D4_L001_R1.fastq.gz | CP1802-cc369_ACTCGA-C43D4_L001_R2.fastq.gz |
SRR11429916 | SRP254184 | PRJNA615661 | SAMN14464093 | 370 | caecum | CP1802-cc370_TACTCA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc370_TACTCA-C9F6J_L001_R1.fastq.gz | CP1802-cc370_TACTCA-C9F6J_L001_R2.fastq.gz |
SRR11429915 | SRP254184 | PRJNA615661 | SAMN14464094 | 371 | caecum | CP1802-cc371_CAGAGC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc371_CAGAGC-C43D4_L001_R1.fastq.gz | CP1802-cc371_CAGAGC-C43D4_L001_R2.fastq.gz |
SRR11429914 | SRP254184 | PRJNA615661 | SAMN14464095 | 372 | caecum | CP1802-cc372_GGCCTC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc372_GGCCTC-C9F6J_L001_R1.fastq.gz | CP1802-cc372_GGCCTC-C9F6J_L001_R2.fastq.gz |
SRR11429913 | SRP254184 | PRJNA615661 | SAMN14464096 | 373 | caecum | CP1802-cc373_AATCAC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc373_AATCAC-C43D4_L001_R1.fastq.gz | CP1802-cc373_AATCAC-C43D4_L001_R2.fastq.gz |
SRR11429912 | SRP254184 | PRJNA615661 | SAMN14464097 | 374 | caecum | CP1802-cc374_CCCGGC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc374_CCCGGC-C9F6J_L001_R1.fastq.gz | CP1802-cc374_CCCGGC-C9F6J_L001_R2.fastq.gz |
SRR11429911 | SRP254184 | PRJNA615661 | SAMN14464098 | 375 | caecum | CP1802-cc375_TCCCCA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc375_TCCCCA-C43D4_L001_R1.fastq.gz | CP1802-cc375_TCCCCA-C43D4_L001_R2.fastq.gz |
SRR11429910 | SRP254184 | PRJNA615661 | SAMN14464099 | 377 | caecum | CP1802-cc377_CTCTCG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc377_CTCTCG-C43D4_L001_R1.fastq.gz | CP1802-cc377_CTCTCG-C43D4_L001_R2.fastq.gz |
SRR11429909 | SRP254184 | PRJNA615661 | SAMN14464100 | 378 | caecum | CP1802-cc378_CAGATG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc378_CAGATG-C43D4_L001_R1.fastq.gz | CP1802-cc378_CAGATG-C43D4_L001_R2.fastq.gz |
SRR11429908 | SRP254184 | PRJNA615661 | SAMN14464101 | 380 | caecum | CP1802-cc380_GCCGGT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc380_GCCGGT-C9F6J_L001_R1.fastq.gz | CP1802-cc380_GCCGGT-C9F6J_L001_R2.fastq.gz |
SRR11429907 | SRP254184 | PRJNA615661 | SAMN14464102 | 381 | caecum | CP1802-cc381_CAGTCT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc381_CAGTCT-C43D4_L001_R1.fastq.gz | CP1802-cc381_CAGTCT-C43D4_L001_R2.fastq.gz |
SRR11429905 | SRP254184 | PRJNA615661 | SAMN14464103 | 382 | caecum | CP1802-cc382_AAATTG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc382_AAATTG-C43D4_L001_R1.fastq.gz | CP1802-cc382_AAATTG-C43D4_L001_R2.fastq.gz |
SRR11429904 | SRP254184 | PRJNA615661 | SAMN14464104 | 383 | caecum | CP1802-cc383_AGTTTG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc383_AGTTTG-C43D4_L001_R1.fastq.gz | CP1802-cc383_AGTTTG-C43D4_L001_R2.fastq.gz |
SRR11429903 | SRP254184 | PRJNA615661 | SAMN14464105 | 384 | caecum | CP1802-cc384_TCTCGG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc384_TCTCGG-C43D4_L001_R1.fastq.gz | CP1802-cc384_TCTCGG-C43D4_L001_R2.fastq.gz |
SRR11429902 | SRP254184 | PRJNA615661 | SAMN14464106 | 387 | caecum | CP1802-cc387_ACTGCG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc387_ACTGCG-C9F6J_L001_R1.fastq.gz | CP1802-cc387_ACTGCG-C9F6J_L001_R2.fastq.gz |
SRR11429901 | SRP254184 | PRJNA615661 | SAMN14464107 | 389 | caecum | CP1802-cc389_ATTAGG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc389_ATTAGG-C9F6J_L001_R1.fastq.gz | CP1802-cc389_ATTAGG-C9F6J_L001_R2.fastq.gz |
SRR11429900 | SRP254184 | PRJNA615661 | SAMN14464108 | 390 | caecum | CP1802-cc390_ACAGTT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc390_ACAGTT-C43D4_L001_R1.fastq.gz | CP1802-cc390_ACAGTT-C43D4_L001_R2.fastq.gz |
SRR11429899 | SRP254184 | PRJNA615661 | SAMN14464109 | 392 | caecum | CP1802-cc392_GCTATC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc392_GCTATC-C43D4_L001_R1.fastq.gz | CP1802-cc392_GCTATC-C43D4_L001_R2.fastq.gz |
SRR11430094 | SRP254184 | PRJNA615661 | SAMN14464110 | 393 | caecum | CP1802-cc393_TTAAAT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc393_TTAAAT-C43D4_L001_R1.fastq.gz | CP1802-cc393_TTAAAT-C43D4_L001_R2.fastq.gz |
SRR11430093 | SRP254184 | PRJNA615661 | SAMN14464111 | 394 | caecum | CP1802-cc394_TTTGTA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc394_TTTGTA-C43D4_L001_R1.fastq.gz | CP1802-cc394_TTTGTA-C43D4_L001_R2.fastq.gz |
SRR11430092 | SRP254184 | PRJNA615661 | SAMN14464112 | 396 | caecum | CP1802-cc396_GTTACC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc396_GTTACC-C43D4_L001_R1.fastq.gz | CP1802-cc396_GTTACC-C43D4_L001_R2.fastq.gz |
SRR11430090 | SRP254184 | PRJNA615661 | SAMN14464113 | 397 | caecum | CP1802-cc397_CCATTG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc397_CCATTG-C43D4_L001_R1.fastq.gz | CP1802-cc397_CCATTG-C43D4_L001_R2.fastq.gz |
SRR11430089 | SRP254184 | PRJNA615661 | SAMN14464114 | 398 | caecum | CP1802-cc398_TCGCGC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc398_TCGCGC-C43D4_L001_R1.fastq.gz | CP1802-cc398_TCGCGC-C43D4_L001_R2.fastq.gz |
SRR11430088 | SRP254184 | PRJNA615661 | SAMN14464115 | 399 | caecum | CP1802-cc399_TAACTT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc399_TAACTT-C43D4_L001_R1.fastq.gz | CP1802-cc399_TAACTT-C43D4_L001_R2.fastq.gz |
SRR11430087 | SRP254184 | PRJNA615661 | SAMN14464116 | 400 | caecum | CP1802-cc400_GGACTT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc400_GGACTT-C9F6J_L001_R1.fastq.gz | CP1802-cc400_GGACTT-C9F6J_L001_R2.fastq.gz |
SRR11430086 | SRP254184 | PRJNA615661 | SAMN14464117 | 402 | caecum | CP1802-cc402_TCGAAC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc402_TCGAAC-C9F6J_L001_R1.fastq.gz | CP1802-cc402_TCGAAC-C9F6J_L001_R2.fastq.gz |
SRR11430085 | SRP254184 | PRJNA615661 | SAMN14464118 | 404 | caecum | CP1802-cc404_CCGACC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc404_CCGACC-C43D4_L001_R1.fastq.gz | CP1802-cc404_CCGACC-C43D4_L001_R2.fastq.gz |
SRR11430084 | SRP254184 | PRJNA615661 | SAMN14464119 | 406 | caecum | CP1802-cc406_CAGTCT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc406_CAGTCT-C9F6J_L001_R1.fastq.gz | CP1802-cc406_CAGTCT-C9F6J_L001_R2.fastq.gz |
SRR11430083 | SRP254184 | PRJNA615661 | SAMN14464120 | 407 | caecum | CP1802-cc407_GACAGT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc407_GACAGT-C9F6J_L001_R1.fastq.gz | CP1802-cc407_GACAGT-C9F6J_L001_R2.fastq.gz |
SRR11430082 | SRP254184 | PRJNA615661 | SAMN14464121 | 408 | caecum | CP1802-cc408_TTTTTC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc408_TTTTTC-C9F6J_L001_R1.fastq.gz | CP1802-cc408_TTTTTC-C9F6J_L001_R2.fastq.gz |
SRR11430081 | SRP254184 | PRJNA615661 | SAMN14464122 | 409 | caecum | CP1802-cc409_TGCCTT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc409_TGCCTT-C9F6J_L001_R1.fastq.gz | CP1802-cc409_TGCCTT-C9F6J_L001_R2.fastq.gz |
SRR11430079 | SRP254184 | PRJNA615661 | SAMN14464123 | 410 | caecum | CP1802-cc410_GGTAGC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc410_GGTAGC-C43D4_L001_R1.fastq.gz | CP1802-cc410_GGTAGC-C43D4_L001_R2.fastq.gz |
SRR11430078 | SRP254184 | PRJNA615661 | SAMN14464124 | 411 | caecum | CP1802-cc411_GCTATC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc411_GCTATC-C9F6J_L001_R1.fastq.gz | CP1802-cc411_GCTATC-C9F6J_L001_R2.fastq.gz |
SRR11430077 | SRP254184 | PRJNA615661 | SAMN14464125 | 412 | caecum | CP1802-cc412_TTAGCT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc412_TTAGCT-C9F6J_L001_R1.fastq.gz | CP1802-cc412_TTAGCT-C9F6J_L001_R2.fastq.gz |
SRR11430076 | SRP254184 | PRJNA615661 | SAMN14464126 | 413 | caecum | CP1802-cc413_GCAAAT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc413_GCAAAT-C43D4_L001_R1.fastq.gz | CP1802-cc413_GCAAAT-C43D4_L001_R2.fastq.gz |
SRR11430075 | SRP254184 | PRJNA615661 | SAMN14464127 | 414 | caecum | CP1802-cc414_TCGCGC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc414_TCGCGC-C9F6J_L001_R1.fastq.gz | CP1802-cc414_TCGCGC-C9F6J_L001_R2.fastq.gz |
SRR11430074 | SRP254184 | PRJNA615661 | SAMN14464128 | 415 | caecum | CP1802-cc415_ACATAT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc415_ACATAT-C43D4_L001_R1.fastq.gz | CP1802-cc415_ACATAT-C43D4_L001_R2.fastq.gz |
SRR11430073 | SRP254184 | PRJNA615661 | SAMN14464129 | 417 | caecum | CP1802-cc417_GAGCTT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc417_GAGCTT-C43D4_L001_R1.fastq.gz | CP1802-cc417_GAGCTT-C43D4_L001_R2.fastq.gz |
SRR11430072 | SRP254184 | PRJNA615661 | SAMN14464130 | 418 | caecum | CP1802-cc418_CTACGC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc418_CTACGC-C9F6J_L001_R1.fastq.gz | CP1802-cc418_CTACGC-C9F6J_L001_R2.fastq.gz |
SRR11430071 | SRP254184 | PRJNA615661 | SAMN14464131 | 420 | caecum | CP1802-cc420_GCCAAG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc420_GCCAAG-C43D4_L001_R1.fastq.gz | CP1802-cc420_GCCAAG-C43D4_L001_R2.fastq.gz |
SRR11430070 | SRP254184 | PRJNA615661 | SAMN14464132 | 421 | caecum | CP1802-cc421_TGCTGA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc421_TGCTGA-C9F6J_L001_R1.fastq.gz | CP1802-cc421_TGCTGA-C9F6J_L001_R2.fastq.gz |
SRR11430068 | SRP254184 | PRJNA615661 | SAMN14464133 | 422 | caecum | CP1802-cc422_TTTTTC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc422_TTTTTC-C43D4_L001_R1.fastq.gz | CP1802-cc422_TTTTTC-C43D4_L001_R2.fastq.gz |
SRR11430067 | SRP254184 | PRJNA615661 | SAMN14464134 | 423 | caecum | CP1802-cc423_GTCGTG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc423_GTCGTG-C43D4_L001_R1.fastq.gz | CP1802-cc423_GTCGTG-C43D4_L001_R2.fastq.gz |
SRR11430066 | SRP254184 | PRJNA615661 | SAMN14464135 | 424 | caecum | CP1802-cc424_GAGCTT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc424_GAGCTT-C9F6J_L001_R1.fastq.gz | CP1802-cc424_GAGCTT-C9F6J_L001_R2.fastq.gz |
SRR11430065 | SRP254184 | PRJNA615661 | SAMN14464136 | 427 | caecum | CP1802-cc427_GCCTAA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc427_GCCTAA-C9F6J_L001_R1.fastq.gz | CP1802-cc427_GCCTAA-C9F6J_L001_R2.fastq.gz |
SRR11430064 | SRP254184 | PRJNA615661 | SAMN14464137 | 429 | caecum | CP1802-cc429_TTGCTA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc429_TTGCTA-C9F6J_L001_R1.fastq.gz | CP1802-cc429_TTGCTA-C9F6J_L001_R2.fastq.gz |
SRR11430063 | SRP254184 | PRJNA615661 | SAMN14464138 | 430 | caecum | CP1802-cc430_GCAAAT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc430_GCAAAT-C9F6J_L001_R1.fastq.gz | CP1802-cc430_GCAAAT-C9F6J_L001_R2.fastq.gz |
SRR11429898 | SRP254184 | PRJNA615661 | SAMN14464139 | 432 | caecum | CP1802-cc432_TACCTG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc432_TACCTG-C9F6J_L001_R1.fastq.gz | CP1802-cc432_TACCTG-C9F6J_L001_R2.fastq.gz |
SRR11429897 | SRP254184 | PRJNA615661 | SAMN14464140 | 433 | caecum | CP1802-cc433_GTAACA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc433_GTAACA-C43D4_L001_R1.fastq.gz | CP1802-cc433_GTAACA-C43D4_L001_R2.fastq.gz |
SRR11429896 | SRP254184 | PRJNA615661 | SAMN14464141 | 434 | caecum | CP1802-cc434_GTGGGG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc434_GTGGGG-C9F6J_L001_R1.fastq.gz | CP1802-cc434_GTGGGG-C9F6J_L001_R2.fastq.gz |
SRR11429895 | SRP254184 | PRJNA615661 | SAMN14464142 | 436 | caecum | CP1802-cc436_TGCTCC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc436_TGCTCC-C9F6J_L001_R1.fastq.gz | CP1802-cc436_TGCTCC-C9F6J_L001_R2.fastq.gz |
SRR11430059 | SRP254184 | PRJNA615661 | SAMN14464143 | 437 | caecum | CP1802-cc437_TCACAC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc437_TCACAC-C9F6J_L001_R1.fastq.gz | CP1802-cc437_TCACAC-C9F6J_L001_R2.fastq.gz |
SRR11430058 | SRP254184 | PRJNA615661 | SAMN14464144 | 438 | caecum | CP1802-cc438_CTACAT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc438_CTACAT-C9F6J_L001_R1.fastq.gz | CP1802-cc438_CTACAT-C9F6J_L001_R2.fastq.gz |
SRR11430057 | SRP254184 | PRJNA615661 | SAMN14464145 | 439 | caecum | CP1802-cc439_GCAGCT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc439_GCAGCT-C43D4_L001_R1.fastq.gz | CP1802-cc439_GCAGCT-C43D4_L001_R2.fastq.gz |
SRR11430056 | SRP254184 | PRJNA615661 | SAMN14464146 | 440 | caecum | CP1802-cc440_AACGCA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc440_AACGCA-C9F6J_L001_R1.fastq.gz | CP1802-cc440_AACGCA-C9F6J_L001_R2.fastq.gz |
SRR11430055 | SRP254184 | PRJNA615661 | SAMN14464147 | 442 | caecum | CP1802-cc442_GGAGGT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc442_GGAGGT-C43D4_L001_R1.fastq.gz | CP1802-cc442_GGAGGT-C43D4_L001_R2.fastq.gz |
SRR11430054 | SRP254184 | PRJNA615661 | SAMN14464148 | 444 | caecum | CP1802-cc444_TGCGGG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc444_TGCGGG-C9F6J_L001_R1.fastq.gz | CP1802-cc444_TGCGGG-C9F6J_L001_R2.fastq.gz |
SRR11430053 | SRP254184 | PRJNA615661 | SAMN14464149 | 446 | caecum | CP1802-cc446_GGACGG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc446_GGACGG-C9F6J_L001_R1.fastq.gz | CP1802-cc446_GGACGG-C9F6J_L001_R2.fastq.gz |
SRR11430052 | SRP254184 | PRJNA615661 | SAMN14464150 | 447 | caecum | CP1802-cc447_GTTTCT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc447_GTTTCT-C9F6J_L001_R1.fastq.gz | CP1802-cc447_GTTTCT-C9F6J_L001_R2.fastq.gz |
SRR11430051 | SRP254184 | PRJNA615661 | SAMN14464151 | 448 | caecum | CP1802-cc448_ATGAAC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc448_ATGAAC-C9F6J_L001_R1.fastq.gz | CP1802-cc448_ATGAAC-C9F6J_L001_R2.fastq.gz |
SRR11430050 | SRP254184 | PRJNA615661 | SAMN14464152 | 449 | caecum | CP1802-cc449_TCTATG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc449_TCTATG-C9F6J_L001_R1.fastq.gz | CP1802-cc449_TCTATG-C9F6J_L001_R2.fastq.gz |
SRR11430048 | SRP254184 | PRJNA615661 | SAMN14464153 | 450 | caecum | CP1802-cc450_CTAGAG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc450_CTAGAG-C9F6J_L001_R1.fastq.gz | CP1802-cc450_CTAGAG-C9F6J_L001_R2.fastq.gz |
SRR11430047 | SRP254184 | PRJNA615661 | SAMN14464154 | 451 | caecum | CP1802-cc451_AATTGC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc451_AATTGC-C9F6J_L001_R1.fastq.gz | CP1802-cc451_AATTGC-C9F6J_L001_R2.fastq.gz |
SRR11430046 | SRP254184 | PRJNA615661 | SAMN14464155 | 452 | caecum | CP1802-cc452_ATGCTT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc452_ATGCTT-C9F6J_L001_R1.fastq.gz | CP1802-cc452_ATGCTT-C9F6J_L001_R2.fastq.gz |
SRR11430045 | SRP254184 | PRJNA615661 | SAMN14464156 | 453 | caecum | CP1802-cc453_AGAGGG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc453_AGAGGG-C9F6J_L001_R1.fastq.gz | CP1802-cc453_AGAGGG-C9F6J_L001_R2.fastq.gz |
SRR11430044 | SRP254184 | PRJNA615661 | SAMN14464157 | 454 | caecum | CP1802-cc454_CCCAAA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc454_CCCAAA-C9F6J_L001_R1.fastq.gz | CP1802-cc454_CCCAAA-C9F6J_L001_R2.fastq.gz |
SRR11430043 | SRP254184 | PRJNA615661 | SAMN14464158 | 455 | caecum | CP1802-cc455_GATGCT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc455_GATGCT-C9F6J_L001_R1.fastq.gz | CP1802-cc455_GATGCT-C9F6J_L001_R2.fastq.gz |
SRR11430042 | SRP254184 | PRJNA615661 | SAMN14464159 | 457 | caecum | CP1802-cc457_CTCTAC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc457_CTCTAC-C9F6J_L001_R1.fastq.gz | CP1802-cc457_CTCTAC-C9F6J_L001_R2.fastq.gz |
SRR11430041 | SRP254184 | PRJNA615661 | SAMN14464160 | 458 | caecum | CP1802-cc458_CAGGAC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc458_CAGGAC-C43D4_L001_R1.fastq.gz | CP1802-cc458_CAGGAC-C43D4_L001_R2.fastq.gz |
SRR11430040 | SRP254184 | PRJNA615661 | SAMN14464161 | 460 | caecum | CP1802-cc460_CCTTGA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc460_CCTTGA-C9F6J_L001_R1.fastq.gz | CP1802-cc460_CCTTGA-C9F6J_L001_R2.fastq.gz |
SRR11430039 | SRP254184 | PRJNA615661 | SAMN14464162 | 461 | caecum | CP1802-cc461_GTAGAA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc461_GTAGAA-C9F6J_L001_R1.fastq.gz | CP1802-cc461_GTAGAA-C9F6J_L001_R2.fastq.gz |
SRR11430037 | SRP254184 | PRJNA615661 | SAMN14464163 | 463 | caecum | CP1802-cc463_CAACAG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc463_CAACAG-C9F6J_L001_R1.fastq.gz | CP1802-cc463_CAACAG-C9F6J_L001_R2.fastq.gz |
SRR11430036 | SRP254184 | PRJNA615661 | SAMN14464164 | 465 | caecum | CP1802-cc465_CTTGCA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc465_CTTGCA-C9F6J_L001_R1.fastq.gz | CP1802-cc465_CTTGCA-C9F6J_L001_R2.fastq.gz |
SRR11430035 | SRP254184 | PRJNA615661 | SAMN14464165 | 466 | caecum | CP1802-cc466_GGTAGC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc466_GGTAGC-C9F6J_L001_R1.fastq.gz | CP1802-cc466_GGTAGC-C9F6J_L001_R2.fastq.gz |
SRR11430034 | SRP254184 | PRJNA615661 | SAMN14464166 | 467 | caecum | CP1802-cc467_TGGATT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc467_TGGATT-C9F6J_L001_R1.fastq.gz | CP1802-cc467_TGGATT-C9F6J_L001_R2.fastq.gz |
SRR11430033 | SRP254184 | PRJNA615661 | SAMN14464167 | 468 | caecum | CP1802-cc468_AGGATA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc468_AGGATA-C43D4_L001_R1.fastq.gz | CP1802-cc468_AGGATA-C43D4_L001_R2.fastq.gz |
SRR11430032 | SRP254184 | PRJNA615661 | SAMN14464168 | 469 | caecum | CP1802-cc469_TTCGAG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc469_TTCGAG-C9F6J_L001_R1.fastq.gz | CP1802-cc469_TTCGAG-C9F6J_L001_R2.fastq.gz |
SRR11430031 | SRP254184 | PRJNA615661 | SAMN14464169 | 471 | caecum | CP1802-cc471_CTGTAA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc471_CTGTAA-C9F6J_L001_R1.fastq.gz | CP1802-cc471_CTGTAA-C9F6J_L001_R2.fastq.gz |
SRR11430030 | SRP254184 | PRJNA615661 | SAMN14464170 | 472 | caecum | CP1802-cc472_TCCCCA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc472_TCCCCA-C9F6J_L001_R1.fastq.gz | CP1802-cc472_TCCCCA-C9F6J_L001_R2.fastq.gz |
SRR11430029 | SRP254184 | PRJNA615661 | SAMN14464171 | 474 | caecum | CP1802-cc474_GTTCGC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc474_GTTCGC-C9F6J_L001_R1.fastq.gz | CP1802-cc474_GTTCGC-C9F6J_L001_R2.fastq.gz |
SRR11430028 | SRP254184 | PRJNA615661 | SAMN14464172 | 475 | caecum | CP1802-cc475_TCTCGG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc475_TCTCGG-C9F6J_L001_R1.fastq.gz | CP1802-cc475_TCTCGG-C9F6J_L001_R2.fastq.gz |
SRR11430026 | SRP254184 | PRJNA615661 | SAMN14464173 | 476 | caecum | CP1802-cc476_ATAAGA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc476_ATAAGA-C9F6J_L001_R1.fastq.gz | CP1802-cc476_ATAAGA-C9F6J_L001_R2.fastq.gz |
SRR11430025 | SRP254184 | PRJNA615661 | SAMN14464174 | 478 | caecum | CP1802-cc478_ACAGTT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc478_ACAGTT-C9F6J_L001_R1.fastq.gz | CP1802-cc478_ACAGTT-C9F6J_L001_R2.fastq.gz |
SRR11430024 | SRP254184 | PRJNA615661 | SAMN14464175 | 479 | caecum | CP1802-cc479_TTGCCC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc479_TTGCCC-C9F6J_L001_R1.fastq.gz | CP1802-cc479_TTGCCC-C9F6J_L001_R2.fastq.gz |
SRR11430023 | SRP254184 | PRJNA615661 | SAMN14464176 | 480 | caecum | CP1802-cc480_AAATTG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc480_AAATTG-C9F6J_L001_R1.fastq.gz | CP1802-cc480_AAATTG-C9F6J_L001_R2.fastq.gz |
SRR11430022 | SRP254184 | PRJNA615661 | SAMN14464177 | 481 | caecum | CP1802-cc481_TTAAAT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc481_TTAAAT-C9F6J_L001_R1.fastq.gz | CP1802-cc481_TTAAAT-C9F6J_L001_R2.fastq.gz |
SRR11430021 | SRP254184 | PRJNA615661 | SAMN14464178 | 482 | caecum | CP1802-cc482_AGGTTC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc482_AGGTTC-C9F6J_L001_R1.fastq.gz | CP1802-cc482_AGGTTC-C9F6J_L001_R2.fastq.gz |
SRR11430020 | SRP254184 | PRJNA615661 | SAMN14464179 | 483 | caecum | CP1802-cc483_ACTCGA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc483_ACTCGA-C9F6J_L001_R1.fastq.gz | CP1802-cc483_ACTCGA-C9F6J_L001_R2.fastq.gz |
SRR11430019 | SRP254184 | PRJNA615661 | SAMN14464180 | 484 | caecum | CP1802-cc484_TTTGTA | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc484_TTTGTA-C9F6J_L001_R1.fastq.gz | CP1802-cc484_TTTGTA-C9F6J_L001_R2.fastq.gz |
SRR11430018 | SRP254184 | PRJNA615661 | SAMN14464181 | 485 | caecum | CP1802-cc485_CAGATG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc485_CAGATG-C9F6J_L001_R1.fastq.gz | CP1802-cc485_CAGATG-C9F6J_L001_R2.fastq.gz |
SRR11430017 | SRP254184 | PRJNA615661 | SAMN14464182 | 486 | caecum | CP1802-cc486_AGCCTG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc486_AGCCTG-C9F6J_L001_R1.fastq.gz | CP1802-cc486_AGCCTG-C9F6J_L001_R2.fastq.gz |
SRR11430015 | SRP254184 | PRJNA615661 | SAMN14464183 | 488 | caecum | CP1802-cc488_CATGTT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc488_CATGTT-C9F6J_L001_R1.fastq.gz | CP1802-cc488_CATGTT-C9F6J_L001_R2.fastq.gz |
SRR11430014 | SRP254184 | PRJNA615661 | SAMN14464184 | 489 | caecum | CP1802-cc489_CCATTG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc489_CCATTG-C9F6J_L001_R1.fastq.gz | CP1802-cc489_CCATTG-C9F6J_L001_R2.fastq.gz |
SRR11430013 | SRP254184 | PRJNA615661 | SAMN14464185 | 491 | caecum | CP1802-cc491_TATGCG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc491_TATGCG-C9F6J_L001_R1.fastq.gz | CP1802-cc491_TATGCG-C9F6J_L001_R2.fastq.gz |
SRR11430012 | SRP254184 | PRJNA615661 | SAMN14464186 | 493 | caecum | CP1802-cc493_ACATAT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc493_ACATAT-C9F6J_L001_R1.fastq.gz | CP1802-cc493_ACATAT-C9F6J_L001_R2.fastq.gz |
SRR11430011 | SRP254184 | PRJNA615661 | SAMN14464187 | 494 | caecum | CP1802-cc494_CAGAGC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc494_CAGAGC-C9F6J_L001_R1.fastq.gz | CP1802-cc494_CAGAGC-C9F6J_L001_R2.fastq.gz |
SRR11430010 | SRP254184 | PRJNA615661 | SAMN14464188 | 495 | caecum | CP1802-cc495_AATATG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc495_AATATG-C9F6J_L001_R1.fastq.gz | CP1802-cc495_AATATG-C9F6J_L001_R2.fastq.gz |
SRR11430009 | SRP254184 | PRJNA615661 | SAMN14464189 | 497 | caecum | CP1802-cc497_AATCAC | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc497_AATCAC-C9F6J_L001_R1.fastq.gz | CP1802-cc497_AATCAC-C9F6J_L001_R2.fastq.gz |
SRR11430008 | SRP254184 | PRJNA615661 | SAMN14464190 | 499 | caecum | CP1802-cc499_CTCTCG | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc499_CTCTCG-C9F6J_L001_R1.fastq.gz | CP1802-cc499_CTCTCG-C9F6J_L001_R2.fastq.gz |
SRR11430007 | SRP254184 | PRJNA615661 | SAMN14464191 | 500 | caecum | CP1802-cc500_CACACT | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802-cc500_CACACT-C9F6J_L001_R1.fastq.gz | CP1802-cc500_CACACT-C9F6J_L001_R2.fastq.gz |
SRR11430006 | SRP254184 | PRJNA615661 | SAMN14464192 | 301 | appendix_vermiformis | CP1802v301_CTGAGG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v301_CTGAGG-CCCBN_L001_R1.fastq.gz | CP1802v301_CTGAGG-CCCBN_L001_R2.fastq.gz |
SRR11430004 | SRP254184 | PRJNA615661 | SAMN14464193 | 302 | appendix_vermiformis | CP1802v302_TCATCA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v302_TCATCA-CCCBN_L001_R1.fastq.gz | CP1802v302_TCATCA-CCCBN_L001_R2.fastq.gz |
SRR11430003 | SRP254184 | PRJNA615661 | SAMN14464194 | 303 | appendix_vermiformis | CP1802v303_CTTGCA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v303_CTTGCA-CCCBN_L001_R1.fastq.gz | CP1802v303_CTTGCA-CCCBN_L001_R2.fastq.gz |
SRR11430002 | SRP254184 | PRJNA615661 | SAMN14464195 | 304 | appendix_vermiformis | CP1802v304_CATGTT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v304_CATGTT-CCCBN_L001_R1.fastq.gz | CP1802v304_CATGTT-CCCBN_L001_R2.fastq.gz |
SRR11430001 | SRP254184 | PRJNA615661 | SAMN14464196 | 309 | appendix_vermiformis | CP1802v309_TTCGAG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v309_TTCGAG-CCCBN_L001_R1.fastq.gz | CP1802v309_TTCGAG-CCCBN_L001_R2.fastq.gz |
SRR11430000 | SRP254184 | PRJNA615661 | SAMN14464197 | 310 | appendix_vermiformis | CP1802v310_AAGCTA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v310_AAGCTA-CCCBN_L001_R1.fastq.gz | CP1802v310_AAGCTA-CCCBN_L001_R2.fastq.gz |
SRR11429999 | SRP254184 | PRJNA615661 | SAMN14464198 | 312 | appendix_vermiformis | CP1802v312_TCCCCA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v312_TCCCCA-CCCBN_L001_R1.fastq.gz | CP1802v312_TCCCCA-CCCBN_L001_R2.fastq.gz |
SRR11429998 | SRP254184 | PRJNA615661 | SAMN14464199 | 313 | appendix_vermiformis | CP1802v313_AACTAG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v313_AACTAG-CCCBN_L001_R1.fastq.gz | CP1802v313_AACTAG-CCCBN_L001_R2.fastq.gz |
SRR11429997 | SRP254184 | PRJNA615661 | SAMN14464200 | 314 | appendix_vermiformis | CP1802v314_GTTCGC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v314_GTTCGC-CCCBN_L001_R1.fastq.gz | CP1802v314_GTTCGC-CCCBN_L001_R2.fastq.gz |
SRR11429996 | SRP254184 | PRJNA615661 | SAMN14464201 | 316 | appendix_vermiformis | CP1802v316_ATAAGA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v316_ATAAGA-CCCBN_L001_R1.fastq.gz | CP1802v316_ATAAGA-CCCBN_L001_R2.fastq.gz |
SRR11429995 | SRP254184 | PRJNA615661 | SAMN14464202 | 319 | appendix_vermiformis | CP1802v319_ACAGTT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v319_ACAGTT-CCCBN_L001_R1.fastq.gz | CP1802v319_ACAGTT-CCCBN_L001_R2.fastq.gz |
SRR11429893 | SRP254184 | PRJNA615661 | SAMN14464203 | 320 | appendix_vermiformis | CP1802v320_TTGCCC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v320_TTGCCC-CCCBN_L001_R1.fastq.gz | CP1802v320_TTGCCC-CCCBN_L001_R2.fastq.gz |
SRR11429892 | SRP254184 | PRJNA615661 | SAMN14464204 | 321 | appendix_vermiformis | CP1802v321_CAGTCT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v321_CAGTCT-CCCBN_L001_R1.fastq.gz | CP1802v321_CAGTCT-CCCBN_L001_R2.fastq.gz |
SRR11429891 | SRP254184 | PRJNA615661 | SAMN14464205 | 322 | appendix_vermiformis | CP1802v322_TTAAAT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v322_TTAAAT-CCCBN_L001_R1.fastq.gz | CP1802v322_TTAAAT-CCCBN_L001_R2.fastq.gz |
SRR11429890 | SRP254184 | PRJNA615661 | SAMN14464206 | 324 | appendix_vermiformis | CP1802v324_ACTCGA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v324_ACTCGA-CCCBN_L001_R1.fastq.gz | CP1802v324_ACTCGA-CCCBN_L001_R2.fastq.gz |
SRR11429889 | SRP254184 | PRJNA615661 | SAMN14464207 | 326 | appendix_vermiformis | CP1802v326_CAGATG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v326_CAGATG-CCCBN_L001_R1.fastq.gz | CP1802v326_CAGATG-CCCBN_L001_R2.fastq.gz |
SRR11429888 | SRP254184 | PRJNA615661 | SAMN14464208 | 327 | appendix_vermiformis | CP1802v327_TCGCGC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v327_TCGCGC-CCCBN_L001_R1.fastq.gz | CP1802v327_TCGCGC-CCCBN_L001_R2.fastq.gz |
SRR11429887 | SRP254184 | PRJNA615661 | SAMN14464209 | 328 | appendix_vermiformis | CP1802v328_TAACTT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v328_TAACTT-CCCBN_L001_R1.fastq.gz | CP1802v328_TAACTT-CCCBN_L001_R2.fastq.gz |
SRR11429886 | SRP254184 | PRJNA615661 | SAMN14464210 | 329 | appendix_vermiformis | CP1802v329_CTGTAA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v329_CTGTAA-CCCBN_L001_R1.fastq.gz | CP1802v329_CTGTAA-CCCBN_L001_R2.fastq.gz |
SRR11429885 | SRP254184 | PRJNA615661 | SAMN14464211 | 330 | appendix_vermiformis | CP1802v330_CCATTG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v330_CCATTG-CCCBN_L001_R1.fastq.gz | CP1802v330_CCATTG-CCCBN_L001_R2.fastq.gz |
SRR11429884 | SRP254184 | PRJNA615661 | SAMN14464212 | 331 | appendix_vermiformis | CP1802v331_TAGGCT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v331_TAGGCT-CCCBN_L001_R1.fastq.gz | CP1802v331_TAGGCT-CCCBN_L001_R2.fastq.gz |
SRR11429882 | SRP254184 | PRJNA615661 | SAMN14464213 | 332 | appendix_vermiformis | CP1802v332_TTCTTG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v332_TTCTTG-CCCBN_L001_R1.fastq.gz | CP1802v332_TTCTTG-CCCBN_L001_R2.fastq.gz |
SRR11429881 | SRP254184 | PRJNA615661 | SAMN14464214 | 333 | appendix_vermiformis | CP1802v333_CCGACC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v333_CCGACC-CCCBN_L001_R1.fastq.gz | CP1802v333_CCGACC-CCCBN_L001_R2.fastq.gz |
SRR11429880 | SRP254184 | PRJNA615661 | SAMN14464215 | 334 | appendix_vermiformis | CP1802v334_TTAGCT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v334_TTAGCT-CCCBN_L001_R1.fastq.gz | CP1802v334_TTAGCT-CCCBN_L001_R2.fastq.gz |
SRR11429879 | SRP254184 | PRJNA615661 | SAMN14464216 | 335 | appendix_vermiformis | CP1802v335_CAGAGC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v335_CAGAGC-CCCBN_L001_R1.fastq.gz | CP1802v335_CAGAGC-CCCBN_L001_R2.fastq.gz |
SRR11429878 | SRP254184 | PRJNA615661 | SAMN14464217 | 337 | appendix_vermiformis | CP1802v337_ATTCTC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v337_ATTCTC-CCCBN_L001_R1.fastq.gz | CP1802v337_ATTCTC-CCCBN_L001_R2.fastq.gz |
SRR11429877 | SRP254184 | PRJNA615661 | SAMN14464218 | 338 | appendix_vermiformis | CP1802v338_CGAAGG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v338_CGAAGG-CCCBN_L001_R1.fastq.gz | CP1802v338_CGAAGG-CCCBN_L001_R2.fastq.gz |
SRR11429876 | SRP254184 | PRJNA615661 | SAMN14464219 | 340 | appendix_vermiformis | CP1802v340_AAAGTA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v340_AAAGTA-CCCBN_L001_R1.fastq.gz | CP1802v340_AAAGTA-CCCBN_L001_R2.fastq.gz |
SRR11429875 | SRP254184 | PRJNA615661 | SAMN14464220 | 341 | appendix_vermiformis | CP1802v341_TCAGCG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v341_TCAGCG-CCCBN_L001_R1.fastq.gz | CP1802v341_TCAGCG-CCCBN_L001_R2.fastq.gz |
SRR11429874 | SRP254184 | PRJNA615661 | SAMN14464221 | 342 | appendix_vermiformis | CP1802v342_AGGCGC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v342_AGGCGC-CCCBN_L001_R1.fastq.gz | CP1802v342_AGGCGC-CCCBN_L001_R2.fastq.gz |
SRR11429873 | SRP254184 | PRJNA615661 | SAMN14464222 | 343 | appendix_vermiformis | CP1802v343_AATCCG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v343_AATCCG-CCCBN_L001_R1.fastq.gz | CP1802v343_AATCCG-CCCBN_L001_R2.fastq.gz |
SRR11429871 | SRP254184 | PRJNA615661 | SAMN14464223 | 344 | appendix_vermiformis | CP1802v344_TGATGC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v344_TGATGC-CCCBN_L001_R1.fastq.gz | CP1802v344_TGATGC-CCCBN_L001_R2.fastq.gz |
SRR11429870 | SRP254184 | PRJNA615661 | SAMN14464224 | 347 | appendix_vermiformis | CP1802v347_GTGAAT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v347_GTGAAT-CCCBN_L001_R1.fastq.gz | CP1802v347_GTGAAT-CCCBN_L001_R2.fastq.gz |
SRR11429869 | SRP254184 | PRJNA615661 | SAMN14464225 | 349 | appendix_vermiformis | CP1802v349_TGTCGT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v349_TGTCGT-CCCBN_L001_R1.fastq.gz | CP1802v349_TGTCGT-CCCBN_L001_R2.fastq.gz |
SRR11429868 | SRP254184 | PRJNA615661 | SAMN14464226 | 350 | appendix_vermiformis | CP1802v350_CACTAA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v350_CACTAA-CCCBN_L001_R1.fastq.gz | CP1802v350_CACTAA-CCCBN_L001_R2.fastq.gz |
SRR11429867 | SRP254184 | PRJNA615661 | SAMN14464227 | 352 | appendix_vermiformis | CP1802v352_ACATTA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v352_ACATTA-CCCBN_L001_R1.fastq.gz | CP1802v352_ACATTA-CCCBN_L001_R2.fastq.gz |
SRR11429866 | SRP254184 | PRJNA615661 | SAMN14464228 | 353 | appendix_vermiformis | CP1802v353_GGGTCT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v353_GGGTCT-CCCBN_L001_R1.fastq.gz | CP1802v353_GGGTCT-CCCBN_L001_R2.fastq.gz |
SRR11429865 | SRP254184 | PRJNA615661 | SAMN14464229 | 354 | appendix_vermiformis | CP1802v354_CCAAGC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v354_CCAAGC-CCCBN_L001_R1.fastq.gz | CP1802v354_CCAAGC-CCCBN_L001_R2.fastq.gz |
SRR11429864 | SRP254184 | PRJNA615661 | SAMN14464230 | 356 | appendix_vermiformis | CP1802v356_CGTTAA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v356_CGTTAA-CCCBN_L001_R1.fastq.gz | CP1802v356_CGTTAA-CCCBN_L001_R2.fastq.gz |
SRR11429863 | SRP254184 | PRJNA615661 | SAMN14464231 | 357 | appendix_vermiformis | CP1802v357_GTGTAG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v357_GTGTAG-CCCBN_L001_R1.fastq.gz | CP1802v357_GTGTAG-CCCBN_L001_R2.fastq.gz |
SRR11429862 | SRP254184 | PRJNA615661 | SAMN14464232 | 358 | appendix_vermiformis | CP1802v358_CACCTC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v358_CACCTC-CCCBN_L001_R1.fastq.gz | CP1802v358_CACCTC-CCCBN_L001_R2.fastq.gz |
SRR11429860 | SRP254184 | PRJNA615661 | SAMN14464233 | 359 | appendix_vermiformis | CP1802v359_TAAATG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v359_TAAATG-CCCBN_L001_R1.fastq.gz | CP1802v359_TAAATG-CCCBN_L001_R2.fastq.gz |
SRR11429859 | SRP254184 | PRJNA615661 | SAMN14464234 | 360 | appendix_vermiformis | CP1802v360_CTTGAC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v360_CTTGAC-CCCBN_L001_R1.fastq.gz | CP1802v360_CTTGAC-CCCBN_L001_R2.fastq.gz |
SRR11429858 | SRP254184 | PRJNA615661 | SAMN14464235 | 362 | appendix_vermiformis | CP1802v362_AAGTAA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v362_AAGTAA-CCCBN_L001_R1.fastq.gz | CP1802v362_AAGTAA-CCCBN_L001_R2.fastq.gz |
SRR11429857 | SRP254184 | PRJNA615661 | SAMN14464236 | 364 | appendix_vermiformis | CP1802v364_AGAATC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v364_AGAATC-CCCBN_L001_R1.fastq.gz | CP1802v364_AGAATC-CCCBN_L001_R2.fastq.gz |
SRR11429856 | SRP254184 | PRJNA615661 | SAMN14464237 | 366 | appendix_vermiformis | CP1802v366_CGGAAC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v366_CGGAAC-CCCBN_L001_R1.fastq.gz | CP1802v366_CGGAAC-CCCBN_L001_R2.fastq.gz |
SRR11429855 | SRP254184 | PRJNA615661 | SAMN14464238 | 367 | appendix_vermiformis | CP1802v367_ATTTGT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v367_ATTTGT-CCCBN_L001_R1.fastq.gz | CP1802v367_ATTTGT-CCCBN_L001_R2.fastq.gz |
SRR11429854 | SRP254184 | PRJNA615661 | SAMN14464239 | 368 | appendix_vermiformis | CP1802v368_GCCCAC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v368_GCCCAC-CCCBN_L001_R1.fastq.gz | CP1802v368_GCCCAC-CCCBN_L001_R2.fastq.gz |
SRR11429853 | SRP254184 | PRJNA615661 | SAMN14464240 | 369 | appendix_vermiformis | CP1802v369_AACCAT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v369_AACCAT-CCCBN_L001_R1.fastq.gz | CP1802v369_AACCAT-CCCBN_L001_R2.fastq.gz |
SRR11429852 | SRP254184 | PRJNA615661 | SAMN14464241 | 370 | appendix_vermiformis | CP1802v370_GGGGGA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v370_GGGGGA-CCCBN_L001_R1.fastq.gz | CP1802v370_GGGGGA-CCCBN_L001_R2.fastq.gz |
SRR11429851 | SRP254184 | PRJNA615661 | SAMN14464242 | 371 | appendix_vermiformis | CP1802v371_TAGTAC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v371_TAGTAC-CCCBN_L001_R1.fastq.gz | CP1802v371_TAGTAC-CCCBN_L001_R2.fastq.gz |
SRR11429848 | SRP254184 | PRJNA615661 | SAMN14464243 | 372 | appendix_vermiformis | CP1802v372_GTTCTT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v372_GTTCTT-CCCBN_L001_R1.fastq.gz | CP1802v372_GTTCTT-CCCBN_L001_R2.fastq.gz |
SRR11429847 | SRP254184 | PRJNA615661 | SAMN14464244 | 373 | appendix_vermiformis | CP1802v373_ACAGAC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v373_ACAGAC-CCCBN_L001_R1.fastq.gz | CP1802v373_ACAGAC-CCCBN_L001_R2.fastq.gz |
SRR11429846 | SRP254184 | PRJNA615661 | SAMN14464245 | 374 | appendix_vermiformis | CP1802v374_GTTGCG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v374_GTTGCG-CCCBN_L001_R1.fastq.gz | CP1802v374_GTTGCG-CCCBN_L001_R2.fastq.gz |
SRR11429845 | SRP254184 | PRJNA615661 | SAMN14464246 | 375 | appendix_vermiformis | CP1802v375_AAACTC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v375_AAACTC-CCCBN_L001_R1.fastq.gz | CP1802v375_AAACTC-CCCBN_L001_R2.fastq.gz |
SRR11429844 | SRP254184 | PRJNA615661 | SAMN14464247 | 377 | appendix_vermiformis | CP1802v377_TCTTAA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v377_TCTTAA-CCCBN_L001_R1.fastq.gz | CP1802v377_TCTTAA-CCCBN_L001_R2.fastq.gz |
SRR11429843 | SRP254184 | PRJNA615661 | SAMN14464248 | 378 | appendix_vermiformis | CP1802v378_CGCGTG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v378_CGCGTG-CCCBN_L001_R1.fastq.gz | CP1802v378_CGCGTG-CCCBN_L001_R2.fastq.gz |
SRR11429842 | SRP254184 | PRJNA615661 | SAMN14464249 | 380 | appendix_vermiformis | CP1802v380_AAGGCC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v380_AAGGCC-CCCBN_L001_R1.fastq.gz | CP1802v380_AAGGCC-CCCBN_L001_R2.fastq.gz |
SRR11429841 | SRP254184 | PRJNA615661 | SAMN14464250 | 381 | appendix_vermiformis | CP1802v381_TGCACG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v381_TGCACG-CCCBN_L001_R1.fastq.gz | CP1802v381_TGCACG-CCCBN_L001_R2.fastq.gz |
SRR11429840 | SRP254184 | PRJNA615661 | SAMN14464251 | 382 | appendix_vermiformis | CP1802v382_CAGTGA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v382_CAGTGA-CCCBN_L001_R1.fastq.gz | CP1802v382_CAGTGA-CCCBN_L001_R2.fastq.gz |
SRR11429839 | SRP254184 | PRJNA615661 | SAMN14464252 | 383 | appendix_vermiformis | CP1802v383_GCCGGT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v383_GCCGGT-CCCBN_L001_R1.fastq.gz | CP1802v383_GCCGGT-CCCBN_L001_R2.fastq.gz |
SRR11429837 | SRP254184 | PRJNA615661 | SAMN14464253 | 384 | appendix_vermiformis | CP1802v384_CTTAAA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v384_CTTAAA-CCCBN_L001_R1.fastq.gz | CP1802v384_CTTAAA-CCCBN_L001_R2.fastq.gz |
SRR11429836 | SRP254184 | PRJNA615661 | SAMN14464254 | 387 | appendix_vermiformis | CP1802v387_GAGCAA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v387_GAGCAA-CCCBN_L001_R1.fastq.gz | CP1802v387_GAGCAA-CCCBN_L001_R2.fastq.gz |
SRR11429835 | SRP254184 | PRJNA615661 | SAMN14464255 | 389 | appendix_vermiformis | CP1802v389_GGCCTC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v389_GGCCTC-CCCBN_L001_R1.fastq.gz | CP1802v389_GGCCTC-CCCBN_L001_R2.fastq.gz |
SRR11429834 | SRP254184 | PRJNA615661 | SAMN14464256 | 390 | appendix_vermiformis | CP1802v390_ATCGGG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v390_ATCGGG-CCCBN_L001_R1.fastq.gz | CP1802v390_ATCGGG-CCCBN_L001_R2.fastq.gz |
SRR11429833 | SRP254184 | PRJNA615661 | SAMN14464257 | 392 | appendix_vermiformis | CP1802v392_TACTCA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v392_TACTCA-CCCBN_L001_R1.fastq.gz | CP1802v392_TACTCA-CCCBN_L001_R2.fastq.gz |
SRR11429832 | SRP254184 | PRJNA615661 | SAMN14464258 | 393 | appendix_vermiformis | CP1802v393_ATAACG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v393_ATAACG-CCCBN_L001_R1.fastq.gz | CP1802v393_ATAACG-CCCBN_L001_R2.fastq.gz |
SRR11429831 | SRP254184 | PRJNA615661 | SAMN14464259 | 394 | appendix_vermiformis | CP1802v394_GAGGGC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v394_GAGGGC-CCCBN_L001_R1.fastq.gz | CP1802v394_GAGGGC-CCCBN_L001_R2.fastq.gz |
SRR11429994 | SRP254184 | PRJNA615661 | SAMN14464260 | 396 | appendix_vermiformis | CP1802v396_CGTTTC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v396_CGTTTC-CCCBN_L001_R1.fastq.gz | CP1802v396_CGTTTC-CCCBN_L001_R2.fastq.gz |
SRR11429993 | SRP254184 | PRJNA615661 | SAMN14464261 | 397 | appendix_vermiformis | CP1802v397_CCCGTT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v397_CCCGTT-CCCBN_L001_R1.fastq.gz | CP1802v397_CCCGTT-CCCBN_L001_R2.fastq.gz |
SRR11429992 | SRP254184 | PRJNA615661 | SAMN14464262 | 398 | appendix_vermiformis | CP1802v398_GGTCAC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v398_GGTCAC-CCCBN_L001_R1.fastq.gz | CP1802v398_GGTCAC-CCCBN_L001_R2.fastq.gz |
SRR11429990 | SRP254184 | PRJNA615661 | SAMN14464263 | 399 | appendix_vermiformis | CP1802v399_AGTGCT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v399_AGTGCT-CCCBN_L001_R1.fastq.gz | CP1802v399_AGTGCT-CCCBN_L001_R2.fastq.gz |
SRR11429989 | SRP254184 | PRJNA615661 | SAMN14464264 | 400 | appendix_vermiformis | CP1802v400_GACATC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v400_GACATC-CCCBN_L001_R1.fastq.gz | CP1802v400_GACATC-CCCBN_L001_R2.fastq.gz |
SRR11429988 | SRP254184 | PRJNA615661 | SAMN14464265 | 402 | appendix_vermiformis | CP1802v402_CTCGGT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v402_CTCGGT-CCCBN_L001_R1.fastq.gz | CP1802v402_CTCGGT-CCCBN_L001_R2.fastq.gz |
SRR11429987 | SRP254184 | PRJNA615661 | SAMN14464266 | 404 | appendix_vermiformis | CP1802v404_GTGTTT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v404_GTGTTT-CCCBN_L001_R1.fastq.gz | CP1802v404_GTGTTT-CCCBN_L001_R2.fastq.gz |
SRR11429986 | SRP254184 | PRJNA615661 | SAMN14464267 | 406 | appendix_vermiformis | CP1802v406_ACTTTT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v406_ACTTTT-CCCBN_L001_R1.fastq.gz | CP1802v406_ACTTTT-CCCBN_L001_R2.fastq.gz |
SRR11429985 | SRP254184 | PRJNA615661 | SAMN14464268 | 407 | appendix_vermiformis | CP1802v407_GGCCAA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v407_GGCCAA-CCCBN_L001_R1.fastq.gz | CP1802v407_GGCCAA-CCCBN_L001_R2.fastq.gz |
SRR11429984 | SRP254184 | PRJNA615661 | SAMN14464269 | 408 | appendix_vermiformis | CP1802v408_GACAGT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v408_GACAGT-CCCBN_L001_R1.fastq.gz | CP1802v408_GACAGT-CCCBN_L001_R2.fastq.gz |
SRR11429983 | SRP254184 | PRJNA615661 | SAMN14464270 | 409 | appendix_vermiformis | CP1802v409_ATGTCA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v409_ATGTCA-CCCBN_L001_R1.fastq.gz | CP1802v409_ATGTCA-CCCBN_L001_R2.fastq.gz |
SRR11429982 | SRP254184 | PRJNA615661 | SAMN14464271 | 410 | appendix_vermiformis | CP1802v410_GCAGCT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v410_GCAGCT-CCCBN_L001_R1.fastq.gz | CP1802v410_GCAGCT-CCCBN_L001_R2.fastq.gz |
SRR11429981 | SRP254184 | PRJNA615661 | SAMN14464272 | 411 | appendix_vermiformis | CP1802v411_CGTCGC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v411_CGTCGC-CCCBN_L001_R1.fastq.gz | CP1802v411_CGTCGC-CCCBN_L001_R2.fastq.gz |
SRR11429979 | SRP254184 | PRJNA615661 | SAMN14464273 | 412 | appendix_vermiformis | CP1802v412_CGTTGG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v412_CGTTGG-CCCBN_L001_R1.fastq.gz | CP1802v412_CGTTGG-CCCBN_L001_R2.fastq.gz |
SRR11429978 | SRP254184 | PRJNA615661 | SAMN14464274 | 413 | appendix_vermiformis | CP1802v413_ACCAGG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v413_ACCAGG-CCCBN_L001_R1.fastq.gz | CP1802v413_ACCAGG-CCCBN_L001_R2.fastq.gz |
SRR11429977 | SRP254184 | PRJNA615661 | SAMN14464275 | 414 | appendix_vermiformis | CP1802v414_TGTGCC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v414_TGTGCC-CCCBN_L001_R1.fastq.gz | CP1802v414_TGTGCC-CCCBN_L001_R2.fastq.gz |
SRR11429976 | SRP254184 | PRJNA615661 | SAMN14464276 | 415 | appendix_vermiformis | CP1802v415_GGACTT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v415_GGACTT-CCCBN_L001_R1.fastq.gz | CP1802v415_GGACTT-CCCBN_L001_R2.fastq.gz |
SRR11429975 | SRP254184 | PRJNA615661 | SAMN14464277 | 417 | appendix_vermiformis | CP1802v417_CATCCT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v417_CATCCT-CCCBN_L001_R1.fastq.gz | CP1802v417_CATCCT-CCCBN_L001_R2.fastq.gz |
SRR11429974 | SRP254184 | PRJNA615661 | SAMN14464278 | 418 | appendix_vermiformis | CP1802v418_GTCGGC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v418_GTCGGC-CCCBN_L001_R1.fastq.gz | CP1802v418_GTCGGC-CCCBN_L001_R2.fastq.gz |
SRR11429973 | SRP254184 | PRJNA615661 | SAMN14464279 | 420 | appendix_vermiformis | CP1802v420_CAGCGT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v420_CAGCGT-CCCBN_L001_R1.fastq.gz | CP1802v420_CAGCGT-CCCBN_L001_R2.fastq.gz |
SRR11429972 | SRP254184 | PRJNA615661 | SAMN14464280 | 421 | appendix_vermiformis | CP1802v421_GGATCA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v421_GGATCA-CCCBN_L001_R1.fastq.gz | CP1802v421_GGATCA-CCCBN_L001_R2.fastq.gz |
SRR11429971 | SRP254184 | PRJNA615661 | SAMN14464281 | 422 | appendix_vermiformis | CP1802v422_CCCCAT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v422_CCCCAT-CCCBN_L001_R1.fastq.gz | CP1802v422_CCCCAT-CCCBN_L001_R2.fastq.gz |
SRR11429970 | SRP254184 | PRJNA615661 | SAMN14464282 | 423 | appendix_vermiformis | CP1802v423_TTGTGA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v423_TTGTGA-CCCBN_L001_R1.fastq.gz | CP1802v423_TTGTGA-CCCBN_L001_R2.fastq.gz |
SRR11429968 | SRP254184 | PRJNA615661 | SAMN14464283 | 424 | appendix_vermiformis | CP1802v424_AGATAG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v424_AGATAG-CCCBN_L001_R1.fastq.gz | CP1802v424_AGATAG-CCCBN_L001_R2.fastq.gz |
SRR11429967 | SRP254184 | PRJNA615661 | SAMN14464284 | 427 | appendix_vermiformis | CP1802v427_ATTAGG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v427_ATTAGG-CCCBN_L001_R1.fastq.gz | CP1802v427_ATTAGG-CCCBN_L001_R2.fastq.gz |
SRR11429966 | SRP254184 | PRJNA615661 | SAMN14464285 | 429 | appendix_vermiformis | CP1802v429_AAAGCG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v429_AAAGCG-CCCBN_L001_R1.fastq.gz | CP1802v429_AAAGCG-CCCBN_L001_R2.fastq.gz |
SRR11429965 | SRP254184 | PRJNA615661 | SAMN14464286 | 430 | appendix_vermiformis | CP1802v430_TTGCTA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v430_TTGCTA-CCCBN_L001_R1.fastq.gz | CP1802v430_TTGCTA-CCCBN_L001_R2.fastq.gz |
SRR11429964 | SRP254184 | PRJNA615661 | SAMN14464287 | 432 | appendix_vermiformis | CP1802v432_CTACTA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v432_CTACTA-CCCBN_L001_R1.fastq.gz | CP1802v432_CTACTA-CCCBN_L001_R2.fastq.gz |
SRR11429963 | SRP254184 | PRJNA615661 | SAMN14464288 | 433 | appendix_vermiformis | CP1802v433_TGCGCT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v433_TGCGCT-CCCBN_L001_R1.fastq.gz | CP1802v433_TGCGCT-CCCBN_L001_R2.fastq.gz |
SRR11429962 | SRP254184 | PRJNA615661 | SAMN14464289 | 434 | appendix_vermiformis | CP1802v434_ACGATC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v434_ACGATC-CCCBN_L001_R1.fastq.gz | CP1802v434_ACGATC-CCCBN_L001_R2.fastq.gz |
SRR11429961 | SRP254184 | PRJNA615661 | SAMN14464290 | 436 | appendix_vermiformis | CP1802v436_GATAGA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v436_GATAGA-CCCBN_L001_R1.fastq.gz | CP1802v436_GATAGA-CCCBN_L001_R2.fastq.gz |
SRR11429960 | SRP254184 | PRJNA615661 | SAMN14464291 | 437 | appendix_vermiformis | CP1802v437_TATCAT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v437_TATCAT-CCCBN_L001_R1.fastq.gz | CP1802v437_TATCAT-CCCBN_L001_R2.fastq.gz |
SRR11429959 | SRP254184 | PRJNA615661 | SAMN14464292 | 438 | appendix_vermiformis | CP1802v438_CTAGTC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v438_CTAGTC-CCCBN_L001_R1.fastq.gz | CP1802v438_CTAGTC-CCCBN_L001_R2.fastq.gz |
SRR11429957 | SRP254184 | PRJNA615661 | SAMN14464293 | 439 | appendix_vermiformis | CP1802v439_GGCTTG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v439_GGCTTG-CCCBN_L001_R1.fastq.gz | CP1802v439_GGCTTG-CCCBN_L001_R2.fastq.gz |
SRR11429956 | SRP254184 | PRJNA615661 | SAMN14464294 | 440 | appendix_vermiformis | CP1802v440_CCTCCC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v440_CCTCCC-CCCBN_L001_R1.fastq.gz | CP1802v440_CCTCCC-CCCBN_L001_R2.fastq.gz |
SRR11429955 | SRP254184 | PRJNA615661 | SAMN14464295 | 442 | appendix_vermiformis | CP1802v442_AGGGCA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v442_AGGGCA-CCCBN_L001_R1.fastq.gz | CP1802v442_AGGGCA-CCCBN_L001_R2.fastq.gz |
SRR11429954 | SRP254184 | PRJNA615661 | SAMN14464296 | 444 | appendix_vermiformis | CP1802v444_GATCTG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v444_GATCTG-CCCBN_L001_R1.fastq.gz | CP1802v444_GATCTG-CCCBN_L001_R2.fastq.gz |
SRR11429953 | SRP254184 | PRJNA615661 | SAMN14464297 | 446 | appendix_vermiformis | CP1802v446_GCCGCG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v446_GCCGCG-CCCBN_L001_R1.fastq.gz | CP1802v446_GCCGCG-CCCBN_L001_R2.fastq.gz |
SRR11429952 | SRP254184 | PRJNA615661 | SAMN14464298 | 447 | appendix_vermiformis | CP1802v447_TAGGAA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v447_TAGGAA-CCCBN_L001_R1.fastq.gz | CP1802v447_TAGGAA-CCCBN_L001_R2.fastq.gz |
SRR11429951 | SRP254184 | PRJNA615661 | SAMN14464299 | 448 | appendix_vermiformis | CP1802v448_TATCGA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v448_TATCGA-CCCBN_L001_R1.fastq.gz | CP1802v448_TATCGA-CCCBN_L001_R2.fastq.gz |
SRR11429950 | SRP254184 | PRJNA615661 | SAMN14464300 | 449 | appendix_vermiformis | CP1802v449_TCGAGG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v449_TCGAGG-CCCBN_L001_R1.fastq.gz | CP1802v449_TCGAGG-CCCBN_L001_R2.fastq.gz |
SRR11429949 | SRP254184 | PRJNA615661 | SAMN14464301 | 450 | appendix_vermiformis | CP1802v450_CGATAC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v450_CGATAC-CCCBN_L001_R1.fastq.gz | CP1802v450_CGATAC-CCCBN_L001_R2.fastq.gz |
SRR11429948 | SRP254184 | PRJNA615661 | SAMN14464302 | 451 | appendix_vermiformis | CP1802v451_TGGTCA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v451_TGGTCA-CCCBN_L001_R1.fastq.gz | CP1802v451_TGGTCA-CCCBN_L001_R2.fastq.gz |
SRR11429946 | SRP254184 | PRJNA615661 | SAMN14464303 | 452 | appendix_vermiformis | CP1802v452_CACCGG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v452_CACCGG-CCCBN_L001_R1.fastq.gz | CP1802v452_CACCGG-CCCBN_L001_R2.fastq.gz |
SRR11429945 | SRP254184 | PRJNA615661 | SAMN14464304 | 453 | appendix_vermiformis | CP1802v453_TCATGT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v453_TCATGT-CCCBN_L001_R1.fastq.gz | CP1802v453_TCATGT-CCCBN_L001_R2.fastq.gz |
SRR11429944 | SRP254184 | PRJNA615661 | SAMN14464305 | 454 | appendix_vermiformis | CP1802v454_TCTCTC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v454_TCTCTC-CCCBN_L001_R1.fastq.gz | CP1802v454_TCTCTC-CCCBN_L001_R2.fastq.gz |
SRR11429943 | SRP254184 | PRJNA615661 | SAMN14464306 | 455 | appendix_vermiformis | CP1802v455_GTAGTT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v455_GTAGTT-CCCBN_L001_R1.fastq.gz | CP1802v455_GTAGTT-CCCBN_L001_R2.fastq.gz |
SRR11429942 | SRP254184 | PRJNA615661 | SAMN14464307 | 457 | appendix_vermiformis | CP1802v457_AACCGA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v457_AACCGA-CCCBN_L001_R1.fastq.gz | CP1802v457_AACCGA-CCCBN_L001_R2.fastq.gz |
SRR11429941 | SRP254184 | PRJNA615661 | SAMN14464308 | 458 | appendix_vermiformis | CP1802v458_GGCAAT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v458_GGCAAT-CCCBN_L001_R1.fastq.gz | CP1802v458_GGCAAT-CCCBN_L001_R2.fastq.gz |
SRR11429940 | SRP254184 | PRJNA615661 | SAMN14464309 | 460 | appendix_vermiformis | CP1802v460_CTCATA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v460_CTCATA-CCCBN_L001_R1.fastq.gz | CP1802v460_CTCATA-CCCBN_L001_R2.fastq.gz |
SRR11429939 | SRP254184 | PRJNA615661 | SAMN14464310 | 461 | appendix_vermiformis | CP1802v461_GAGTTG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v461_GAGTTG-CCCBN_L001_R1.fastq.gz | CP1802v461_GAGTTG-CCCBN_L001_R2.fastq.gz |
SRR11429938 | SRP254184 | PRJNA615661 | SAMN14464311 | 463 | appendix_vermiformis | CP1802v463_AATTCT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v463_AATTCT-CCCBN_L001_R1.fastq.gz | CP1802v463_AATTCT-CCCBN_L001_R2.fastq.gz |
SRR11429937 | SRP254184 | PRJNA615661 | SAMN14464312 | 465 | appendix_vermiformis | CP1802v465_CTAGGA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v465_CTAGGA-CCCBN_L001_R1.fastq.gz | CP1802v465_CTAGGA-CCCBN_L001_R2.fastq.gz |
SRR11429935 | SRP254184 | PRJNA615661 | SAMN14464313 | 466 | appendix_vermiformis | CP1802v466_TGACCT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v466_TGACCT-CCCBN_L001_R1.fastq.gz | CP1802v466_TGACCT-CCCBN_L001_R2.fastq.gz |
SRR11429934 | SRP254184 | PRJNA615661 | SAMN14464314 | 467 | appendix_vermiformis | CP1802v467_CAGTTC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v467_CAGTTC-CCCBN_L001_R1.fastq.gz | CP1802v467_CAGTTC-CCCBN_L001_R2.fastq.gz |
SRR11429933 | SRP254184 | PRJNA615661 | SAMN14464315 | 468 | appendix_vermiformis | CP1802v468_TGCAGT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v468_TGCAGT-CCCBN_L001_R1.fastq.gz | CP1802v468_TGCAGT-CCCBN_L001_R2.fastq.gz |
SRR11429932 | SRP254184 | PRJNA615661 | SAMN14464316 | 469 | appendix_vermiformis | CP1802v469_AATGAA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v469_AATGAA-CCCBN_L001_R1.fastq.gz | CP1802v469_AATGAA-CCCBN_L001_R2.fastq.gz |
SRR11429931 | SRP254184 | PRJNA615661 | SAMN14464317 | 471 | appendix_vermiformis | CP1802v471_CACTGT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v471_CACTGT-CCCBN_L001_R1.fastq.gz | CP1802v471_CACTGT-CCCBN_L001_R2.fastq.gz |
SRR11429830 | SRP254184 | PRJNA615661 | SAMN14464318 | 472 | appendix_vermiformis | CP1802v472_GTGCCA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v472_GTGCCA-CCCBN_L001_R1.fastq.gz | CP1802v472_GTGCCA-CCCBN_L001_R2.fastq.gz |
SRR11429829 | SRP254184 | PRJNA615661 | SAMN14464319 | 474 | appendix_vermiformis | CP1802v474_GTGACG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v474_GTGACG-CCCBN_L001_R1.fastq.gz | CP1802v474_GTGACG-CCCBN_L001_R2.fastq.gz |
SRR11429828 | SRP254184 | PRJNA615661 | SAMN14464320 | 475 | appendix_vermiformis | CP1802v475_GGTCCG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v475_GGTCCG-CCCBN_L001_R1.fastq.gz | CP1802v475_GGTCCG-CCCBN_L001_R2.fastq.gz |
SRR11429827 | SRP254184 | PRJNA615661 | SAMN14464321 | 476 | appendix_vermiformis | CP1802v476_AACTTA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v476_AACTTA-CCCBN_L001_R1.fastq.gz | CP1802v476_AACTTA-CCCBN_L001_R2.fastq.gz |
SRR11429826 | SRP254184 | PRJNA615661 | SAMN14464322 | 478 | appendix_vermiformis | CP1802v478_CAACGA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v478_CAACGA-CCCBN_L001_R1.fastq.gz | CP1802v478_CAACGA-CCCBN_L001_R2.fastq.gz |
SRR11429824 | SRP254184 | PRJNA615661 | SAMN14464323 | 479 | appendix_vermiformis | CP1802v479_AAGGTG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v479_AAGGTG-CCCBN_L001_R1.fastq.gz | CP1802v479_AAGGTG-CCCBN_L001_R2.fastq.gz |
SRR11429823 | SRP254184 | PRJNA615661 | SAMN14464324 | 480 | appendix_vermiformis | CP1802v480_TTCAAC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v480_TTCAAC-CCCBN_L001_R1.fastq.gz | CP1802v480_TTCAAC-CCCBN_L001_R2.fastq.gz |
SRR11429822 | SRP254184 | PRJNA615661 | SAMN14464325 | 481 | appendix_vermiformis | CP1802v481_ACGAAT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v481_ACGAAT-CCCBN_L001_R1.fastq.gz | CP1802v481_ACGAAT-CCCBN_L001_R2.fastq.gz |
SRR11429821 | SRP254184 | PRJNA615661 | SAMN14464326 | 482 | appendix_vermiformis | CP1802v482_GGATTC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v482_GGATTC-CCCBN_L001_R1.fastq.gz | CP1802v482_GGATTC-CCCBN_L001_R2.fastq.gz |
SRR11429820 | SRP254184 | PRJNA615661 | SAMN14464327 | 483 | appendix_vermiformis | CP1802v483_CAGGAC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v483_CAGGAC-CCCBN_L001_R1.fastq.gz | CP1802v483_CAGGAC-CCCBN_L001_R2.fastq.gz |
SRR11429819 | SRP254184 | PRJNA615661 | SAMN14464328 | 484 | appendix_vermiformis | CP1802v484_GCATGG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v484_GCATGG-CCCBN_L001_R1.fastq.gz | CP1802v484_GCATGG-CCCBN_L001_R2.fastq.gz |
SRR11429818 | SRP254184 | PRJNA615661 | SAMN14464329 | 485 | appendix_vermiformis | CP1802v485_CTGCAC-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v485_CTGCAC-CCCBN_L001_R1.fastq.gz | CP1802v485_CTGCAC-CCCBN_L001_R2.fastq.gz |
SRR11429817 | SRP254184 | PRJNA615661 | SAMN14464330 | 486 | appendix_vermiformis | CP1802v486_TTTCCG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v486_TTTCCG-CCCBN_L001_R1.fastq.gz | CP1802v486_TTTCCG-CCCBN_L001_R2.fastq.gz |
SRR11429816 | SRP254184 | PRJNA615661 | SAMN14464331 | 488 | appendix_vermiformis | CP1802v488_AATGGT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v488_AATGGT-CCCBN_L001_R1.fastq.gz | CP1802v488_AATGGT-CCCBN_L001_R2.fastq.gz |
SRR11429815 | SRP254184 | PRJNA615661 | SAMN14464332 | 489 | appendix_vermiformis | CP1802v489_GTAACA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v489_GTAACA-CCCBN_L001_R1.fastq.gz | CP1802v489_GTAACA-CCCBN_L001_R2.fastq.gz |
SRR11429813 | SRP254184 | PRJNA615661 | SAMN14464333 | 491 | appendix_vermiformis | CP1802v491_CAGGCG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v491_CAGGCG-CCCBN_L001_R1.fastq.gz | CP1802v491_CAGGCG-CCCBN_L001_R2.fastq.gz |
SRR11429812 | SRP254184 | PRJNA615661 | SAMN14464334 | 493 | appendix_vermiformis | CP1802v493_ACGGTA-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v493_ACGGTA-CCCBN_L001_R1.fastq.gz | CP1802v493_ACGGTA-CCCBN_L001_R2.fastq.gz |
SRR11429811 | SRP254184 | PRJNA615661 | SAMN14464335 | 494 | appendix_vermiformis | CP1802v494_ACACCG-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v494_ACACCG-CCCBN_L001_R1.fastq.gz | CP1802v494_ACACCG-CCCBN_L001_R2.fastq.gz |
SRR11429810 | SRP254184 | PRJNA615661 | SAMN14464336 | 495 | appendix_vermiformis | CP1802v495_AGTATT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v495_AGTATT-CCCBN_L001_R1.fastq.gz | CP1802v495_AGTATT-CCCBN_L001_R2.fastq.gz |
SRR11429809 | SRP254184 | PRJNA615661 | SAMN14464337 | 499 | appendix_vermiformis | CP1802v499_CCGGGT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v499_CCGGGT-CCCBN_L001_R1.fastq.gz | CP1802v499_CCGGGT-CCCBN_L001_R2.fastq.gz |
SRR11429808 | SRP254184 | PRJNA615661 | SAMN14464338 | 500 | appendix_vermiformis | CP1802v500_GTCATT-C | 16S rDNA caecum | AMPLICON | METAGENOMIC | PCR | paired | ILLUMINA | Illumina MiSeq | PCR of V3-V4 DNA16S region | fastq | CP1802v500_GTCATT-CCCBN_L001_R1.fastq.gz | CP1802v500_GTCATT-CCCBN_L001_R2.fastq.gz |