Table 1 Summary of the sequencing data used in the assembly and annotation of Plagiognathops microlepis genome.

From: Chromosome-level genome assembly of Plagiognathops microlepis based on PacBio HiFi and Hi-C sequencing

Library types

Sample

Platform

Bases (Gb)

Reads Count

Mean length (bp)

N50 (bp)

SMRT Bell

muscle

PacBio Sequel II (HiFi)

33.62

1,886,766

17,821

17,008

Hi-C

muscle

Illumina Novaseq 6000

99.57

663,833,500

150

150

Short-read

muscle

Illumina Novaseq 6000

44.58

297,234,724

150

150

RNA-seq

mix

Illumina Novaseq 6000

11.48

38,269,877

150

150

  1. Note: Sample used for RNA-seq are mix of the muscle, heart, liver, brain, gill and spleen tissues.
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