Table 7 Statistic of the annotated non-coding RNAs in the genome.

From: Chromosome-level genome assembly of Plagiognathops microlepis based on PacBio HiFi and Hi-C sequencing

Type

 

Copy

Average length(bp)

Total length(bp)

% of genome

miRNA

 

2,442

72

175,788

0.0175

tRNA

 

9,677

76

734,733

0.0732

rRNA

rRNA

4,455

150

669,710

0.0667

 

18 S

19

1,855

35,240

0.0035

 

28 S

16

7,412

118,585

0.0118

 

5.8 S

1,977

115

227,592

0.0227

 

5 S

2,443

118

288,293

0.0287

snRNA

snRNA

1,058

154

162,753

0.0162

 

CD-box

442

178

78,716

0.0078

 

HACA-box

76

152

11,555

0.0012

 

splicing

517

135

69,686

0.0069

 

scaRNA

9

225

2,025

0.0002

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