Table 5 Main relations among bio-entities involving RNA with the RO identifier (* symmetric relationship).

From: An ontology-based knowledge graph for representing interactions involving RNA molecules

Relation ID

Name

Inverse Relation ID

Inverse Name

RO:0000056

participates in

RO:0000057

has participant

RO:0000079

function of

RO:0000085

has function

RO:0011013

indirectly positively regulates activity of

  

RO:0001015

location of

RO:0001025

located in

RO:0011016

indirectly negatively regulates activity of

  

RO:0002202

develops from

RO:0002203

develops into

RO:0002204

gene product of

RO:0002205

has gene product

RO:0002245

over-expressed in

  

RO:0002246

under-expressed in

  

RO:0002260

has biological role

  

RO:0002263

acts upstream of

  

RO:0002264

acts upstream of or within

  

RO:0002291

ubiquitously expressed in

RO:0002293

ubiquitously expresses

RO:0002302

is treated by substance

RO:0002606

is substance that treats

RO:0002314

characteristic of part of

  

RO:0002325

colocalizes with*

  

RO:0002326

contributes to

  

RO:0002327

enables

RO:0002333

enabled by

RO:0002331

involved in

  

RO:0002387

has potential to develop into

  

RO:0002428

involved in regulation of

  

RO:0002430

involved in negative regulation of

  

RO:0002432

is active in

  

RO:0002434

interacts with*

  

RO:0002435

genetically interacts with*

  

RO:0002436

molecularly interacts with*

  

RO:0002448

directly regulates activity of

  

RO:0002449

directly negatively regulates activity of

  

RO:0002450

directly positively regulates activity of

  

RO:0002479

has part that occurs in

  

RO:0002526

overlaps sequence of*

  

RO:0002528

is upstream of sequence of

RO:0002529

is downstream of sequence of

RO:0002559

causally influenced by

RO:0002566

causally influences

RO:0003002

represses expression of

  

RO:0003302

causes or contributes to condition

  

RO:0004033

acts upstream of or within, negative effect

  

RO:0004035

acts upstream of, negative effect

  

RO:0010001

generically depends on

RO:0010002

is carrier of

RO:0011002

regulates activity of

  

RO:0011007

decreases by repression quantity of

  

BFO:0000050

part of

BFO:0000051

has part

RO:HOM0000000

in similarity relationship with*

  

RO:HOM0000001

in homology relationship with*

  
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